RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CLMNQ96JQ2 1002 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 C12orf42Q96LP6 360 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MIPEPQ99797 713 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 ALDH8A1Q9H2A2 487 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 TMOD4Q9NZQ9 345 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 REV1Q9UBZ9 1251 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLC45A1Q9Y2W3 748 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CYP46A1Q9Y6A2 500 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 TACC3Q9Y6A5 838 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 NEDD4P46934 1319 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 A0A0G2JLL6 359 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 FAM155AB1AL88 458 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SMIM22K7EJ46 135 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 IFIT3O14879 490 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 WDR46O15213 610 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 PRC1O43663 620 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 PLA2G6O60733 806 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 HTR3BO95264 441 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 BPNT1O95861 308 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CALM1P0DP23 149 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CALM2P0DP24 149 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CALM3P0DP25 149 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 EEF2P13639 858 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CASTP20810 708 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 RPS6KB1P23443 525 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 HOXA7P31268 230 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 TM4SF4P48230 202 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CLCQ05315 142 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 PPP2R5BQ15173 497 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 RABEP1Q15276 862 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SEC23AQ15436 765 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SEZ6Q53EL9 994 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 IFIT1BQ5T764 474 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SYNE3Q6ZMZ3 975 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SPRED2Q7Z698 418 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 PRRT2Q7Z6L0 340 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SGMS1Q86VZ5 419 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 SIAH1Q8IUQ4 282 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 ENAHQ8N8S7 591 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 KCT2Q8NC54 265 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 IGDCC4Q8TDY8 1250 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 PPP1R13LQ8WUF5 828 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 NKD1Q969G9 470 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CAPNS2Q96L46 248 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 JAKMIP1Q96N16 626 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 FEZ1Q99689 392 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 AGXT2Q9BYV1 514 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 VCPKMTQ9H867 229 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 KAT14Q9H8E8 782 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 IL17RBQ9NRM6 502 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 CLIP2Q9UDT6 1046 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 STX8Q9UNK0 236 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 TNKSO95271 1327 aa6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
HMGB1P44-201ENST00000508597 MYPNQ86TC9 1320 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 TRIM75PA6NK02 468 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 F5H6K3 240 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 SH2B2O14492 632 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 DDAH1O94760 285 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 SMARCA1P28370 1054 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 GRIK1P39086 918 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 MCM2P49736 904 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 GNAQP50148 359 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 EVCP57679 992 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 JAG1P78504 1218 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 KLRC3Q07444 240 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 NKPD1Q17RQ9 610 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 ADCK5Q3MIX3 580 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 TMEM67Q5HYA8 995 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 TMEM201Q5SNT2 666 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 GPATCH4Q5T3I0 446 aaKnown RBP6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 LETMD1Q6P1Q0 360 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZNF574Q6ZN55 896 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 CYB5R4Q7L1T6 521 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 CATIPQ7Z7H3 387 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 ANKRD23Q86SG2 305 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 DCAF4Q8WV16 495 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 HOXC10Q9NYD6 342 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 CCDC39Q9UFE4 941 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 PNMA2Q9UL42 364 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 AGTPBP1Q9UPW5 1226 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 EFR3BQ9Y2G0 817 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
HMGB1P44-201ENST00000508597 LOC285556D6RIA3 1793 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CCL15-CCL14A0A0B4J2E2 113 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CCDC196A0A1B0GTZ2 297 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 A0A1W2PRG0 241 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CCDC69A6NI79 296 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CA12O43570 354 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SNHG28P0DPA3 235 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms