RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 RANBP6O60518 1105 aaKnown RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 CABYRO75952 493 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 FGBP02675 491 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 ICAM1P05362 532 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 SLC3A2P08195 630 aaKnown RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 CALML3P27482 149 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 NOVP48745 357 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 USP11P51784 963 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 PURAQ00577 322 aaKnown RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 TFF2Q03403 129 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 BAATQ14032 418 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 TTLL4Q14679 1199 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 NAA30Q147X3 362 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 TKFCQ3LXA3 575 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 RRP12Q5JTH9 1297 aaKnown RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 AKNAD1Q5T1N1 836 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 KRT40Q6A162 431 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 RCSD1Q6JBY9 416 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 PDE12Q6L8Q7 609 aaKnown RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 SPRED2Q7Z698 418 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 DEFB128Q7Z7B8 93 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 MORC4Q8TE76 937 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 STK32AQ8WU08 396 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 CHURC1Q8WUH1 139 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 COPS5Q92905 334 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 FAM227BQ96M60 508 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 ASB2Q96Q27 587 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 ALDH8A1Q9H2A2 487 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-210ENST00000507965 CPVLQ9H3G5 476 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 CERS4Q9HA82 394 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 SLC28A3Q9HAS3 691 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 VTA1Q9NP79 307 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 MSRAQ9UJ68 235 aa6.52□□□□□ -1.37
ATXN3-210ENST00000507965 TNKSO95271 1327 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 XIRP2A4UGR9 3374 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 PDE2AO00408 941 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ERC2O15083 957 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ORC4O43929 436 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 PLA2G6O60733 806 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 CA3P07451 260 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 MYL3P08590 195 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 PDHBP11177 359 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ATP2A2P16615 1042 aaKnown RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ITGB5P18084 799 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 KCNQ1P51787 676 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 HAND2P61296 217 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 OCLNQ16625 522 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 DUSP28Q4G0W2 176 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 FAM47CQ5HY64 1035 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 SYDE2Q5VT97 1194 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 IQSEC1Q6DN90 963 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 SND1Q7KZF4 910 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ZNF438Q7Z4V0 828 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TMCO2Q7Z6W1 182 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ZNF589Q86UQ0 364 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TBC1D10CQ8IV04 446 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 SMG8Q8ND04 991 aaKnown RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 OR6J1Q8NGC5 347 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 DCAF4Q8WV16 495 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 CLEC4DQ8WXI8 215 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TBC1D32Q96NH3 1257 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TMEM47Q9BQJ4 181 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 WDR11Q9BZH6 1224 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 MTIF3Q9H2K0 278 aaKnown RBP6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TOMM22Q9NS69 142 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 TMEM63CQ9P1W3 806 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 ANAPC4Q9UJX5 808 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 SLC4A7Q9Y6M7 1214 aa6.51□□□□□ -1.37
ATXN3-210ENST00000507965 NEDD4P46934 1319 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 MYO9BQ13459 2157 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 RBM47A0AV96 593 aaKnown RBP6.5□□□□□ -1.37
ATXN3-210ENST00000507965 ZEB2O60315 1214 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 ARIH2O95376 493 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 GOLGA8HP0CJ92 632 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-210ENST00000507965 USH1GQ495M9 461 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 NFXL1Q6ZNB6 911 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 RNF207Q6ZRF8 634 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 SHISA5Q8N114 240 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 ATXN2LQ8WWM7 1075 aaKnown RBP6.5□□□□□ -1.37
ATXN3-210ENST00000507965 CTAGE1Q96RT6 745 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 UHRF1Q96T88 793 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-210ENST00000507965 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 STIM2Q9P246 746 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 SALL4Q9UJQ4 1053 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 Q9Y3F1 56 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 PCDHA11Q9Y5I1 949 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 TRANK1O15050 2925 aa6.5□□□□□ -1.37
ATXN3-210ENST00000507965 FGAP02671 866 aa6.49□□□□□ -1.37
ATXN3-210ENST00000507965 FGRP09769 529 aa6.49□□□□□ -1.37
ATXN3-210ENST00000507965 TOP1P11387 765 aaKnown RBP6.49□□□□□ -1.37
ATXN3-210ENST00000507965 ACPPP15309 386 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms