RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 HNRNPLLQ8WVV9 542 aaKnown RBP19.27■□□□□ 0.68
SFXN1-208ENST00000507823 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
SFXN1-208ENST00000507823 SLC9A2Q9UBY0 812 aa19.27■□□□□ 0.68
SFXN1-208ENST00000507823 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
SFXN1-208ENST00000507823 PFASO15067 1338 aa19.27■□□□□ 0.67
SFXN1-208ENST00000507823 IGSF9BQ9UPX0 1349 aa19.27■□□□□ 0.67
SFXN1-208ENST00000507823 IRF6O14896 467 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 ITIH3Q06033 890 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 TREML2Q5T2D2 321 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 CC2D1AQ6P1N0 951 aaPredicted RBP19.26■□□□□ 0.67
SFXN1-208ENST00000507823 MAEAQ7L5Y9 396 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 MAP4K3Q8IVH8 894 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 PROCA1Q8NCQ7 364 aaPredicted RBP19.26■□□□□ 0.67
SFXN1-208ENST00000507823 TMEM161BQ8NDZ6 487 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 NOX5Q96PH1 765 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 STK33Q9BYT3 514 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 GABBR1Q9UBS5 961 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 ATG7O95352 703 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 FERP16591 822 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 BMS1Q14692 1282 aaKnown RBP19.26■□□□□ 0.67
SFXN1-208ENST00000507823 FMNL3Q8IVF7 1028 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 OLIG1Q8TAK6 271 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 DCPSQ96C86 337 aaKnown RBP19.26■□□□□ 0.67
SFXN1-208ENST00000507823 GPRC5CQ9NQ84 441 aa19.26■□□□□ 0.67
SFXN1-208ENST00000507823 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
SFXN1-208ENST00000507823 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
SFXN1-208ENST00000507823 PEX3P56589 373 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
SFXN1-208ENST00000507823 XXYLT1Q8NBI6 393 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 ADAMTS1Q9UHI8 967 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 PCDHGC5Q9Y5F6 944 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 CSADQ9Y600 493 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 N4BP1O75113 896 aaKnown RBP19.25■□□□□ 0.67
SFXN1-208ENST00000507823 EDNRBP24530 442 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 ACTR2P61160 394 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 PPATQ06203 517 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 MMS19Q96T76 1030 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 SYT11Q9BT88 431 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 INTS2Q9H0H0 1204 aaKnown RBP19.25■□□□□ 0.67
SFXN1-208ENST00000507823 HSPBP1Q9NZL4 362 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 EXOC7Q9UPT5 735 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
SFXN1-208ENST00000507823 STAT1P42224 750 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 NPTX2P47972 431 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 MYL7Q01449 175 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 ENPEPQ07075 957 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 STXBP2Q15833 593 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 C1orf220Q5T0J3 134 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 NOA1Q8NC60 698 aaKnown RBP19.24■□□□□ 0.67
SFXN1-208ENST00000507823 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 GPR88Q9GZN0 384 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 BTBD7Q9P203 1132 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 TSKSQ9UJT2 592 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 TBX20Q9UMR3 447 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 F8VZ95 297 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 SLC16A4O15374 487 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 DGAT1O75907 488 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 TRIM49P0CI25 452 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 TRIM49CP0CI26 452 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 KRT13P13646 458 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 TCP1P17987 556 aaKnown RBP19.24■□□□□ 0.67
SFXN1-208ENST00000507823 SOX5P35711 763 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 SMTNP53814 917 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 PRKG1Q13976 671 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 FAM102BQ5T8I3 360 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 CREG2Q8IUH2 290 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 CCDC60Q8IWA6 550 aaPredicted RBP19.24■□□□□ 0.67
SFXN1-208ENST00000507823 MCPH1Q8NEM0 835 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 FHDC1Q9C0D6 1143 aaPredicted RBP19.24■□□□□ 0.67
SFXN1-208ENST00000507823 APEX2Q9UBZ4 518 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 NAGPAQ9UK23 515 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 INTUQ9ULD6 942 aa19.24■□□□□ 0.67
SFXN1-208ENST00000507823 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 CXCL11O14625 94 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 SRGAP2O75044 1071 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 SUPT20HL2P0C7V6 817 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 ARID5AQ03989 594 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 PLS1Q14651 629 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 MIS18BP1Q6P0N0 1132 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 VTI1AQ96AJ9 217 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 SH2D3AQ9BRG2 576 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 MYH9P35579 1960 aaKnown RBP19.23■□□□□ 0.67
SFXN1-208ENST00000507823 TISP43B9A030 160 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-208ENST00000507823 KLRC1P26715 233 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
SFXN1-208ENST00000507823 VAMP7P51809 220 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 DMP1Q13316 513 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-208ENST00000507823 SWSAP1Q6NVH7 229 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 WDR93Q6P2C0 686 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 GJB7Q6PEY0 223 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 SLC30A5Q8TAD4 765 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 CEP170P1Q96L14 293 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 PNKPQ96T60 521 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 TLR10Q9BXR5 811 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 XPNPEP1Q9NQW7 623 aa19.23■□□□□ 0.67
SFXN1-208ENST00000507823 HYOU1Q9Y4L1 999 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms