RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CDY2AQ9Y6F7 541 aa9.03□□□□□ -0.96
SCN1A-207ENST00000507401 STK36Q9NRP7 1315 aa9.03□□□□□ -0.96
SCN1A-207ENST00000507401 MYH9P35579 1960 aaKnown RBP9.03□□□□□ -0.96
SCN1A-207ENST00000507401 EPOPA6NHQ4 379 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 DDX39AO00148 427 aaKnown RBP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 RB1P06400 928 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 GHRP10912 638 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 JAK3P52333 1124 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 SCRN1Q12765 414 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 STK3Q13188 491 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 NPY5RQ15761 445 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 AAK1Q2M2I8 961 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 ODR4Q5SWX8 454 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 CKAP2LQ8IYA6 745 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 KIAA0319LQ8IZA0 1049 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 MYRIPQ8NFW9 859 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 RDM1Q8NG50 284 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 WASF1Q92558 559 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 FAM167AQ96KS9 214 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 ASB2Q96Q27 587 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 PHF20Q9BVI0 1012 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 FAM49AQ9H0Q0 323 aaPredicted RBP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 TSPYL1Q9H0U9 437 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 AGO3Q9H9G7 860 aaKnown RBP9.02□□□□□ -0.97
SCN1A-207ENST00000507401 DISC1Q9NRI5 854 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 FAM13BQ9NYF5 915 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 THEGQ9P2T0 379 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 GABBR1Q9UBS5 961 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 COG5Q9UP83 839 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.97
SCN1A-207ENST00000507401 PRRC2BQ5JSZ5 2229 aaKnown RBP9.01□□□□□ -0.97
SCN1A-207ENST00000507401 COL4A6Q14031 1691 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 GAS7O60861 476 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 PSMD10O75832 226 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 UPP2O95045 317 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 TMOD1P28289 359 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 CRYBB1P53674 252 aaPredicted RBP9.01□□□□□ -0.97
SCN1A-207ENST00000507401 TTC3P53804 2025 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 CDC42EP1Q00587 391 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 PDE4CQ08493 712 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 SYCP1Q15431 976 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 LRCH2Q5VUJ6 765 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 PPP4R3AQ6IN85 833 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 B3GNT9Q6UX72 402 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 RTN4RL1Q86UN2 441 aaPredicted RBP9.01□□□□□ -0.97
SCN1A-207ENST00000507401 ZBTB10Q96DT7 871 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 YME1L1Q96TA2 773 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 NAP1L4Q99733 375 aaKnown RBP9.01□□□□□ -0.97
SCN1A-207ENST00000507401 TEKT3Q9BXF9 490 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 PRDM6Q9NQX0 595 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 SAMM50Q9Y512 469 aa9.01□□□□□ -0.97
SCN1A-207ENST00000507401 C5orf67F2Z3F1 127 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 H3BNC9 293 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 K7ELQ4 463 aaPredicted RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 GPR182O15218 404 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 DGKIO75912 1065 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 C22orf31O95567 290 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 STAG3L1P0CL83 205 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 GCFC2P16383 781 aaKnown RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 CD52P31358 61 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 AK2P54819 239 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 SLC20A2Q08357 652 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 TMEM62Q0P6H9 643 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 PAK2Q13177 524 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 PTPROQ16827 1216 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 EPC2Q52LR7 807 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 SPRED2Q7Z698 418 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 TMEM192Q8IY95 271 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 FIBCD1Q8N539 461 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 CLP1Q92989 425 aaKnown RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 ZNF689Q96CS4 500 aaPredicted RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 FAM20AQ96MK3 541 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 AIFM3Q96NN9 605 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 NIFKQ9BYG3 293 aaKnown RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 RC3H2Q9HBD1 1191 aaKnown RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
SCN1A-207ENST00000507401 EVPLQ92817 2033 aa9□□□□□ -0.97
SCN1A-207ENST00000507401 VCANP13611 3396 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 WDR81Q562E7 1941 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 REV3LO60673 3130 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 SIP14410 1827 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 CCDC194A0A1B0GVG4 234 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 TBX3O15119 743 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 ZNF862O60290 1169 aa8.99□□□□□ -0.97
SCN1A-207ENST00000507401 RPS6KA5O75582 802 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms