RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 LMNAP02545 664 aaKnown RBP17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ATP6V1C1P21283 382 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 CALB2P22676 271 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 TM4SF1P30408 202 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ARID5AQ03989 594 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 CALCRLQ16602 461 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 CLEC4GQ6UXB4 293 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 JAMLQ86YT9 394 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 INPP5DQ92835 1189 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ZBTB10Q96DT7 871 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 YIPF3Q9GZM5 350 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 NT5C3AQ9H0P0 336 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 RNPEPL1Q9HAU8 725 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 PCYOX1Q9UHG3 505 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 LAMB2P55268 1798 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 C10orf71Q711Q0 1435 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 MAST2Q6P0Q8 1798 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 TLDC2A0PJX2 215 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 PALM3A6NDB9 673 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ENO4A6NNW6 628 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 NMT2O60551 498 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 PHF2O75151 1096 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 RTN3O95197 1032 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-208ENST00000506368 TMEM253P0C7T8 217 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ACADSP16219 412 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 GNAZP19086 355 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-208ENST00000506368 NAPAP54920 295 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 KCNH2Q12809 1159 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 PLS1Q14651 629 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 ZDHHC24Q6UX98 284 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 GALNT15Q8N3T1 639 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 RFFLQ8WZ73 363 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 TRIM51Q9BSJ1 452 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 MTFR1LQ9H019 292 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 VCXQ9H320 206 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 RPTORQ8N122 1335 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 EYA4O95677 639 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 LMNB1P20700 586 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 ABL2P42684 1182 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
SCLT1-208ENST00000506368 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
SCLT1-208ENST00000506368 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 FAM47AQ5JRC9 791 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 ENDOVQ8N8Q3 282 aaKnown RBP17.15■□□□□ 0.34
SCLT1-208ENST00000506368 CKAP2Q8WWK9 683 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
SCLT1-208ENST00000506368 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 MIF4GDA9UHW6 222 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 RIPK2O43353 540 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 AFPP02771 609 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 RASSF2P50749 326 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 PLTPP55058 493 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 IFI35P80217 286 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 MTHFD1LQ6UB35 978 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 ITFG2Q969R8 447 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 LRMDAQ9H2I8 198 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 DDX3YO15523 660 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 TXKP42681 527 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 HADHBP55084 474 aaKnown RBP17.14■□□□□ 0.33
SCLT1-208ENST00000506368 PPATQ06203 517 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 EXOC3L4Q17RC7 722 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 WASHC2DQ5SRD0 308 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 HYIQ5T013 277 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.14■□□□□ 0.332e-6■■■■■ 37.5
SCLT1-208ENST00000506368 SNX29Q8TEQ0 813 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 STK32AQ8WU08 396 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 ASB3Q9Y575 518 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
SCLT1-208ENST00000506368 SMIM24O75264 130 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 GSTA2P09210 222 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 PTGER2P43116 358 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 JAM2P57087 298 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 CHRNDQ07001 517 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 KLC1Q07866 573 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 ADAM9Q13443 819 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 NUGGCQ68CJ6 796 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 DPY19L2P1Q6NXN4 242 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 ARHGEF18Q6ZSZ5 1173 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 GPIHBP1Q8IV16 184 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 REXO1Q8N1G1 1221 aaKnown RBP17.13■□□□□ 0.33
SCLT1-208ENST00000506368 FBXO25Q8TCJ0 367 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms