RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 BHMT2Q9H2M3 363 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 EYSQ5T1H1 3165 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 DGKIO75912 1065 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
SMN1-204ENST00000506163 GATMP50440 423 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 CEBPZQ03701 1054 aaKnown RBP19.84■□□□□ 0.77
SMN1-204ENST00000506163 HYIQ5T013 277 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 RNF149Q8NC42 400 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 PLIN2Q99541 437 aa19.84■□□□□ 0.77
SMN1-204ENST00000506163 POLR3FQ9H1D9 316 aaPredicted RBP19.84■□□□□ 0.77
SMN1-204ENST00000506163 ZSCAN16Q9H4T2 348 aaPredicted RBP19.84■□□□□ 0.77
SMN1-204ENST00000506163 DENND3A2RUS2 1198 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 ASAP2O43150 1006 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 LINC00271P0C7V0 271 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 CYP11B2P19099 503 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 MARCKSP29966 332 aaPredicted RBP19.83■□□□□ 0.76
SMN1-204ENST00000506163 SARSP49591 514 aaKnown RBP19.83■□□□□ 0.76
SMN1-204ENST00000506163 CAPSQ13938 189 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 ODR4Q5SWX8 454 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 SLC24A5Q71RS6 500 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 BSNDQ8WZ55 320 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 YME1L1Q96TA2 773 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 STXBP5LQ9Y2K9 1186 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 STK24Q9Y6E0 443 aa19.83■□□□□ 0.76
SMN1-204ENST00000506163 ARHGEF35A5YM69 484 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 EYA4O95677 639 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 BMP15O95972 392 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
SMN1-204ENST00000506163 PTENP60484 403 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 MXD4Q14582 209 aaPredicted RBP19.82■□□□□ 0.76
SMN1-204ENST00000506163 ZRSR1Q15695 479 aaKnown RBP19.82■□□□□ 0.76
SMN1-204ENST00000506163 USP49Q70CQ1 688 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 NPAS4Q8IUM7 802 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 ARNTL2Q8WYA1 636 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 CCDC43Q96MW1 224 aaKnown RBP19.82■□□□□ 0.76
SMN1-204ENST00000506163 C17orf80Q9BSJ5 609 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 FBXO2Q9UK22 296 aaPredicted RBP19.82■□□□□ 0.76
SMN1-204ENST00000506163 TRANK1O15050 2925 aa19.82■□□□□ 0.76
SMN1-204ENST00000506163 HOXA11P31270 313 aaPredicted RBP19.81■□□□□ 0.76
SMN1-204ENST00000506163 ERVK-21P61565 698 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 TMEM119Q4V9L6 283 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 SPECC1Q5M775 1068 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 FAM102BQ5T8I3 360 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 SRGAP1Q7Z6B7 1085 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 CLIC6Q96NY7 704 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 C1orf112Q9NSG2 853 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 RNF19AQ9NV58 838 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 TFIP11Q9UBB9 837 aaKnown RBP19.81■□□□□ 0.76
SMN1-204ENST00000506163 DNM3Q9UQ16 869 aa19.81■□□□□ 0.76
SMN1-204ENST00000506163 LPXNO60711 386 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 ZSCAN22P10073 491 aaPredicted RBP19.8■□□□□ 0.76
SMN1-204ENST00000506163 POU5F1BQ06416 359 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 FAM43BQ6ZT52 329 aaPredicted RBP19.8■□□□□ 0.76
SMN1-204ENST00000506163 CATSPER4Q7RTX7 472 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 CABP7Q86V35 215 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 IFNLR1Q8IU57 520 aaPredicted RBP19.8■□□□□ 0.76
SMN1-204ENST00000506163 AK8Q96MA6 479 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 RUSC1Q9BVN2 902 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 INO80BQ9C086 356 aaPredicted RBP19.8■□□□□ 0.76
SMN1-204ENST00000506163 CSRNP2Q9H175 543 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 MTUS1Q9ULD2 1270 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 ZDHHC9Q9Y397 364 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 PRUNE2Q8WUY3 3088 aa19.8■□□□□ 0.76
SMN1-204ENST00000506163 FGFR1P11362 822 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 ATF7P17544 494 aaPredicted RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 SFPQP23246 707 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMN1-204ENST00000506163 LONP1P36776 959 aaKnown RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 NASPP49321 788 aaPredicted RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 MBTD1Q05BQ5 628 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 SLC39A14Q15043 492 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 AMHR2Q16671 573 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 RINT1Q6NUQ1 792 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 C1orf186Q6ZWK4 172 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 ZNF598Q86UK7 904 aaKnown RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 ECHDC2Q86YB7 292 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 DAW1Q8N136 415 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 MCPH1Q8NEM0 835 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 EPSTI1Q96J88 318 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 TGS1Q96RS0 853 aaKnown RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 CHST12Q9NRB3 414 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 PCDHB7Q9Y5E2 793 aa19.79■□□□□ 0.76
SMN1-204ENST00000506163 SRPRBQ9Y5M8 271 aaKnown RBP19.79■□□□□ 0.76
SMN1-204ENST00000506163 A0A0U1RQF3 1178 aa19.78■□□□□ 0.76
SMN1-204ENST00000506163 F13A1P00488 732 aa19.78■□□□□ 0.76
SMN1-204ENST00000506163 STAG3L1P0CL83 205 aa19.78■□□□□ 0.76
SMN1-204ENST00000506163 ZSCAN20P17040 1043 aaPredicted RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 FOXD4L6Q3SYB3 417 aaPredicted RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 FOXD4L3Q6VB84 417 aaPredicted RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 ELAC1Q9H777 363 aaKnown RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 AGPAT5Q9NUQ2 364 aa19.78■□□□□ 0.76
SMN1-204ENST00000506163 PIN4Q9Y237 131 aaKnown RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 PRRC2BQ5JSZ5 2229 aaKnown RBP19.78■□□□□ 0.76
SMN1-204ENST00000506163 ADGRA3Q8IWK6 1321 aa19.78■□□□□ 0.76
SMN1-204ENST00000506163 FOSL2P15408 326 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 PHKA2P46019 1235 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 SLC12A3P55017 1021 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 MAPK7Q13164 816 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 TFDP1Q14186 410 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 KARSQ15046 597 aaKnown RBP19.77■□□□□ 0.76
SMN1-204ENST00000506163 PAN2Q504Q3 1202 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms