RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 MLKLQ8NB16 471 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 KIAA0895Q8NCT3 520 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 SLC17A8Q8NDX2 589 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 ZNF507Q8TCN5 953 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 U2AF1L4Q8WU68 220 aaKnown RBP7.96□□□□□ -1.14
NUP54-204ENST00000506098 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 ANP32BQ92688 251 aaKnown RBP7.96□□□□□ -1.14
NUP54-204ENST00000506098 GPRC5CQ9NQ84 441 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 ANO10Q9NW15 660 aa7.96□□□□□ -1.14
NUP54-204ENST00000506098 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ARVCFO00192 962 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 BIN1O00499 593 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 EIF3DO15371 548 aaKnown RBP eCLIP7.95□□□□□ -1.14
NUP54-204ENST00000506098 TREHO43280 583 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 CLSTN1O94985 981 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 CAVIN2O95810 425 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 RPLP2P05387 115 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 COL6A1P12109 1028 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 CD44P16070 742 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 GLRA2P23416 452 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ABCD1P33897 745 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 PRCPP42785 496 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 NAMPTP43490 491 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 NPTX2P47972 431 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 SMTNP53814 917 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 SOX10P56693 466 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 IGBP1P78318 339 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 GTF2BQ00403 316 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 DRP2Q13474 957 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ALCAMQ13740 583 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 BMT2Q1RMZ1 405 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ODR4Q5SWX8 454 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 C1orf53Q5VUE5 145 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ISM2Q6H9L7 571 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 GDF6Q6KF10 455 aaPredicted RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 FOXR2Q6PJQ5 311 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 MAEAQ7L5Y9 396 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 SERINC5Q86VE9 423 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 FAM178BQ8IXR5 827 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 KIAA0319LQ8IZA0 1049 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ADSSL1Q8N142 457 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 NME8Q8N427 588 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 GUF1Q8N442 669 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 LRRC71Q8N4P6 559 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ASAP3Q8TDY4 903 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 PRPF31Q8WWY3 499 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 PSPC1Q8WXF1 523 aaKnown RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 BSNDQ8WZ55 320 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 TMEM143Q96AN5 459 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 HVCN1Q96D96 273 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 IFT74Q96LB3 600 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 CTAGE1Q96RT6 745 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 NFKBIZQ9BYH8 718 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 GZF1Q9H116 711 aaPredicted RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 POLR3FQ9H1D9 316 aaPredicted RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 POLD4Q9HCU8 107 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 SLC39A2Q9NP94 309 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 STARD7Q9NQZ5 370 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 ARHGAP28Q9P2N2 729 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 SUCLA2Q9P2R7 463 aaPredicted RBP7.95□□□□□ -1.14
NUP54-204ENST00000506098 GDAQ9Y2T3 454 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 UBE4BO95155 1302 aa7.95□□□□□ -1.14
NUP54-204ENST00000506098 H0YCG3 227 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 CYP2C9P11712 490 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ERCC5P28715 1186 aaPredicted RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 NMT1P30419 496 aaKnown RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 CLCN3P51790 818 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 CASP5P51878 434 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 PEX3P56589 373 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ZNF200P98182 395 aaPredicted RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 LAMTOR4Q0VGL1 99 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 PTK7Q13308 1070 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 DMP1Q13316 513 aaPredicted RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 CAPSQ13938 189 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 SNX17Q15036 470 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 DPCR1Q3MIW9 517 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 CDCA2Q69YH5 1023 aaPredicted RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 CENPPQ6IPU0 288 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 TAF2Q6P1X5 1199 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 SLC39A5Q6ZMH5 540 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 STXBP4Q6ZWJ1 553 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 HAUS6Q7Z4H7 955 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ZNF410Q86VK4 478 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 METTL13Q8N6R0 699 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 TMEM161BQ8NDZ6 487 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 HPS3Q969F9 1004 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ZBTB10Q96DT7 871 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 DHTKD1Q96HY7 919 aaPredicted RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 BPIFA3Q9BQP9 254 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 TMEM106CQ9BVX2 250 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 FGFBP2Q9BYJ0 223 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ZHX3Q9H4I2 956 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 MRPL44Q9H9J2 332 aaKnown RBP7.94□□□□□ -1.14
NUP54-204ENST00000506098 SUGCTQ9HAC7 445 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 KMT5AQ9NQR1 393 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 DACH1Q9UI36 760 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms