RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 PPM1AP35813 382 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 DNM2P50570 870 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 ZXDAP98168 799 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 NHLH1Q02575 133 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 STK3Q13188 491 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 NPY5RQ15761 445 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 LONRF3Q496Y0 759 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 XKR3Q5GH77 459 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 ANKRD54Q6NXT1 300 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 SYCE2Q6PIF2 218 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 B3GNT9Q6UX72 402 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 SLC39A11Q8N1S5 342 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
SIL1-208ENST00000505945 FDXACB1Q9BRP7 624 aaPredicted RBP12.79□□□□□ -0.36
SIL1-208ENST00000505945 GCOM2Q9BZD3 368 aaPredicted RBP12.79□□□□□ -0.36
SIL1-208ENST00000505945 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 CYP46A1Q9Y6A2 500 aa12.79□□□□□ -0.36
SIL1-208ENST00000505945 IGKV6-21A0A0C4DH24 114 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 TMEM221A6NGB7 291 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 M0R296 226 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 DEXIO95424 95 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 SRGAP2BP0DMP2 458 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 BCAR1P56945 870 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 CDC42EP1Q00587 391 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 INF2Q27J81 1249 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 BMP8AQ7Z5Y6 402 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 KSR1Q8IVT5 923 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
SIL1-208ENST00000505945 ETNPPLQ8TBG4 499 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 MBOAT7Q96N66 472 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 CHST12Q9NRB3 414 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
SIL1-208ENST00000505945 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
SIL1-208ENST00000505945 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
SIL1-208ENST00000505945 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 EML1O00423 815 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 SLC37A4O43826 429 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 DTNBO60941 627 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
SIL1-208ENST00000505945 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
SIL1-208ENST00000505945 PHKA2P46019 1235 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
SIL1-208ENST00000505945 MRE11P49959 708 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.37
SIL1-208ENST00000505945 IER5LQ5T953 404 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
SIL1-208ENST00000505945 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 CPLX2Q6PUV4 134 aaKnown RBP12.77□□□□□ -0.37
SIL1-208ENST00000505945 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 ANO5Q75V66 913 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 LPPQ93052 612 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 CDH22Q9UJ99 828 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
SIL1-208ENST00000505945 MEIS3P2A8K0S8 358 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 ZC3H11AO75152 810 aaKnown RBP eCLIP12.76□□□□□ -0.37
SIL1-208ENST00000505945 CXCL14O95715 111 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 HOXB8P17481 243 aaPredicted RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
SIL1-208ENST00000505945 CA8P35219 290 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 NPEPPSP55786 919 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 PSMC5P62195 406 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 ZNF410Q86VK4 478 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 NLRP4Q96MN2 994 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 TRAIPQ9BWF2 469 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 MRPL9Q9BYD2 267 aaKnown RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 SLKQ9H2G2 1235 aaPredicted RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
SIL1-208ENST00000505945 PIN4Q9Y237 131 aaKnown RBP12.76□□□□□ -0.37
SIL1-208ENST00000505945 EPB41L2O43491 1005 aaKnown RBP12.75□□□□□ -0.37
SIL1-208ENST00000505945 QARSP47897 775 aaKnown RBP12.75□□□□□ -0.37
SIL1-208ENST00000505945 SIGLEC14Q08ET2 396 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 GLB1LQ6UWU2 654 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 CATSPER4Q7RTX7 472 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 KRT25Q7Z3Z0 450 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 SUGP1Q8IWZ8 645 aaKnown RBP12.75□□□□□ -0.37
SIL1-208ENST00000505945 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 AUTS2Q8WXX7 1259 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 CASP10Q92851 521 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 PHF20Q9BVI0 1012 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 CYP26B1Q9NR63 512 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 FAM105AQ9NUU6 356 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms