RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CFHR4Q92496 578 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 DYDC2Q96IM9 177 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 GPR20Q99678 358 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 NOL10Q9BSC4 688 aaKnown RBP5.42□□□□□ -1.54
CHD1-203ENST00000505657 C14orf119Q9NWQ9 140 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 PPP4R1LQ9P1A2 415 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 SAE1Q9UBE0 346 aaPredicted RBP5.42□□□□□ -1.54
CHD1-203ENST00000505657 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 MYRFQ9Y2G1 1151 aa5.42□□□□□ -1.54
CHD1-203ENST00000505657 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 PLATP00750 562 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 MEOX1P50221 254 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 ERVK-21P61565 698 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 PPP2CBP62714 309 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 PPP2CAP67775 309 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 FAM50AQ14320 339 aaKnown RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 PTPROQ16827 1216 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 RNF219Q5W0B1 726 aaPredicted RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 LIMS2Q7Z4I7 341 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 PLEKHH3Q7Z736 793 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 OR14K1Q8NGZ2 314 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 TGFBRAP1Q8WUH2 860 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 EAF2Q96CJ1 260 aaPredicted RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 FDXACB1Q9BRP7 624 aaPredicted RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 SSBP3Q9BWW4 388 aaPredicted RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 FAM184BQ9ULE4 1060 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 USP18Q9UMW8 372 aa5.41□□□□□ -1.54
CHD1-203ENST00000505657 CTDP1Q9Y5B0 961 aaPredicted RBP5.41□□□□□ -1.54
CHD1-203ENST00000505657 SHROOM4Q9ULL8 1493 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 ST20-MTHFSA0A0A6YYL1 179 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 C2orf78A6NCI8 922 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 ARHGAP6O43182 974 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 AKAP8O43823 692 aaKnown RBP5.4□□□□□ -1.54
CHD1-203ENST00000505657 SCAND1P57086 179 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 HGFACQ04756 655 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 PPARAQ07869 468 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 ZMAT1Q5H9K5 638 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 KLHDC10Q6PID8 442 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 USP30Q70CQ3 517 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 GAREM2Q75VX8 874 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 CNTD1Q8N815 330 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 LMBR1Q8WVP7 490 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 AHCYL2Q96HN2 611 aaKnown RBP5.4□□□□□ -1.54
CHD1-203ENST00000505657 GNRHR2Q96P88 292 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 DPYSL5Q9BPU6 564 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 OR10A2Q9H208 303 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 KCTD10Q9H3F6 313 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 SLC5A4Q9NY91 659 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 NR2E1Q9Y466 385 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 PCDHB6Q9Y5E3 794 aa5.4□□□□□ -1.54
CHD1-203ENST00000505657 GOLGA8AA7E2F4 631 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 GOLGA8BA8MQT2 603 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 H2AFYO75367 372 aaKnown RBP5.39□□□□□ -1.55
CHD1-203ENST00000505657 KATNA1O75449 491 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 NFYCQ13952 458 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 FSCN1Q16658 493 aaKnown RBP5.39□□□□□ -1.55
CHD1-203ENST00000505657 NEIL1Q96FI4 390 aaPredicted RBP5.39□□□□□ -1.55
CHD1-203ENST00000505657 HIST1H2AHQ96KK5 128 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 WDR92Q96MX6 357 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 LRRC37BQ96QE4 947 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 RBM15Q96T37 977 aaKnown RBP eCLIP5.39□□□□□ -1.55
CHD1-203ENST00000505657 HIST1H2AJQ99878 128 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 EVLQ9UI08 416 aaPredicted RBP5.39□□□□□ -1.55
CHD1-203ENST00000505657 PRSS50Q9UI38 385 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 NUMBLQ9Y6R0 609 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 ZNF536O15090 1300 aa5.39□□□□□ -1.55
CHD1-203ENST00000505657 GPR42O15529 346 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 SEC24DO94855 1032 aaPredicted RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 ENPP1P22413 925 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 CANXP27824 592 aaKnown RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 GPR3P46089 330 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 LGALS4P56470 323 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 ADAM8P78325 824 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 ATP2C1P98194 919 aaPredicted RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 DUSP8Q13202 625 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 MTMR1Q13613 665 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 SAFB2Q14151 953 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD1-203ENST00000505657 UGT8Q16880 541 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 RPUSD2Q8IZ73 545 aaKnown RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 CBARPQ8N350 705 aaPredicted RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 CDYL2Q8N8U2 506 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 GAB3Q8WWW8 586 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 LMF1Q96S06 567 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 QRSL1Q9H0R6 528 aaKnown RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 CCDC8Q9H0W5 538 aaPredicted RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 JADE2Q9NQC1 790 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 OAZ3Q9UMX2 235 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 VWA7Q9Y334 891 aa5.38□□□□□ -1.55
CHD1-203ENST00000505657 RBM8AQ9Y5S9 174 aaKnown RBP5.38□□□□□ -1.55
CHD1-203ENST00000505657 K7ESF4 209 aa5.37□□□□□ -1.55
CHD1-203ENST00000505657 SUV39H1O43463 412 aa5.37□□□□□ -1.55
CHD1-203ENST00000505657 ITGB3P05106 788 aa5.37□□□□□ -1.55
CHD1-203ENST00000505657 IARSP41252 1262 aaKnown RBP5.37□□□□□ -1.55
CHD1-203ENST00000505657 GUCY2FP51841 1108 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms