RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 C1GALT1C1Q96EU7 318 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 RAX2Q96IS3 184 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 WNT8AQ9H1J5 351 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 MS4A5Q9H3V2 200 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 SLITRK6Q9H5Y7 841 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 PTPRHQ9HD43 1115 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 GULP1Q9UBP9 304 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 DNM3Q9UQ16 869 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 TPP1O14773 563 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 DTNBO60941 627 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 FUCA1P04066 466 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 MPOP05164 745 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 MRPS9P82933 396 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 KRT72Q14CN4 511 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 TOR2AQ5JU69 321 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 CPZQ66K79 652 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ESRP1Q6NXG1 681 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ZPBP2Q6X784 338 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 PIP4K2CQ8TBX8 421 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 SH3RF2Q8TEC5 729 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 DIS3LQ8TF46 1054 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ZNF496Q96IT1 587 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 C16orf92Q96LL3 132 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 ACO2Q99798 780 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 SELENOOQ9BVL4 669 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 MRIQ9BWK5 157 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 USP40Q9NVE5 1235 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 TAF6LQ9Y6J9 622 aa4.83□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQ45 241 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQY0 241 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 FAM227AF5H4B4 570 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 NDUFS2O75306 463 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SETSIPP0DME0 302 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 C5AR1P21730 350 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SDHAP31040 664 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC16A1P53985 500 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 FAM193AP78312 1265 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SRSF2Q01130 221 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 CAP1Q01518 475 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 KIF23Q02241 960 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 TMEM62Q0P6H9 643 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 CHAF1AQ13111 956 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC9A5Q14940 896 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 ANO1Q5XXA6 986 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 TIGD7Q6NT04 549 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 ERAP2Q6P179 960 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 C1orf228Q6PIY5 440 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 KCTD1Q719H9 257 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SRLQ86TD4 932 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 CXorf67Q86X51 503 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 PHYKPLQ8IUZ5 450 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SMAP1Q8IYB5 467 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 GRAMD1CQ8IYS0 662 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 CAMKK1Q8N5S9 505 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 LZTR1Q8N653 840 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 C7orf31Q8N865 590 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 TP53I13Q8NBR0 393 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 ZBTB34Q8NCN2 500 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 MYRIPQ8NFW9 859 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 PLEKHO2Q8TD55 490 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 RTF1Q92541 710 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 MAML3Q96JK9 1138 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 HERPUD2Q9BSE4 406 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 GTPBP4Q9BZE4 634 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 SMPD4Q9NXE4 827 aa4.82□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 LCHNA4D1U4 455 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 FADS2P1A8MWK0 482 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 C1QTNF3-AMACRE9PGA6 284 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 H3BML4 177 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 TBX3O15119 743 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 BUB1BO60566 1050 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 EFEMP2O95967 443 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 OSMP13725 252 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 PDCP20941 246 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 SDHBP21912 280 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 SERPINB3P29508 390 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 CDR1P51861 262 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 EPHA5P54756 1037 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 YBX1P67809 324 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 MOGSQ13724 837 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 CT83Q5H943 113 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 DARS2Q6PI48 645 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 USP45Q70EL2 814 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 KCNK18Q7Z418 384 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 TICAM2Q86XR7 235 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 THEMISQ8N1K5 641 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms