RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 FBXL6Q8N531 539 aa17.58■□□□□ 0.41
PDCD6-203ENST00000505526 FAM20AQ96MK3 541 aa17.58■□□□□ 0.41
PDCD6-203ENST00000505526 FBXO2Q9UK22 296 aaPredicted RBP17.58■□□□□ 0.41
PDCD6-203ENST00000505526 PADI3Q9ULW8 664 aa17.58■□□□□ 0.41
PDCD6-203ENST00000505526 PCDHGC5Q9Y5F6 944 aa17.58■□□□□ 0.41
PDCD6-203ENST00000505526 TRPV2Q9Y5S1 764 aa17.58■□□□□ 0.41
PDCD6-203ENST00000505526 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.41
PDCD6-203ENST00000505526 GATMP50440 423 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 TCF15Q12870 199 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 IL17AQ16552 155 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 DTHD1Q6ZMT9 781 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 KRI1Q8N9T8 703 aaKnown RBP17.57■□□□□ 0.4
PDCD6-203ENST00000505526 SLC5A5Q92911 643 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
PDCD6-203ENST00000505526 TLE6Q9H808 572 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 LRFN2Q9ULH4 789 aa17.57■□□□□ 0.4
PDCD6-203ENST00000505526 SRPRBQ9Y5M8 271 aaKnown RBP17.57■□□□□ 0.4
PDCD6-203ENST00000505526 VWA3AA6NCI4 1184 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 GRIN1Q05586 938 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 SIGLEC14Q08ET2 396 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PAK2Q13177 524 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 ITGB3BPQ13352 177 aaPredicted RBP17.56■□□□□ 0.4
PDCD6-203ENST00000505526 LRCH2Q5VUJ6 765 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 MICAL1Q8TDZ2 1067 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 CLIC6Q96NY7 704 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PCDHA12Q9UN75 941 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 GAS7O60861 476 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PSMD10O75832 226 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 TECP42680 631 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 TMEM266Q2M3C6 531 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PCYT2Q99447 389 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 RIT2Q99578 217 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 CELF4Q9BZC1 486 aaKnown RBP17.56■□□□□ 0.4
PDCD6-203ENST00000505526 AZI2Q9H6S1 392 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 TRPC6Q9Y210 931 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 PCDHA2Q9Y5H9 948 aa17.56■□□□□ 0.4
PDCD6-203ENST00000505526 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
PDCD6-203ENST00000505526 PER2O15055 1255 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 DHX15O43143 795 aaKnown RBP17.55■□□□□ 0.4
PDCD6-203ENST00000505526 IBSPP21815 317 aaPredicted RBP17.55■□□□□ 0.4
PDCD6-203ENST00000505526 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDCD6-203ENST00000505526 TPRNQ4KMQ1 711 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 TRAPPC12Q8WVT3 735 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 TMX1Q9H3N1 280 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 VAV3Q9UKW4 847 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 PCDHB12Q9Y5F1 795 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 PLXNA4Q9HCM2 1894 aa17.55■□□□□ 0.4
PDCD6-203ENST00000505526 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 CUTAO60888 179 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 PRPF40AO75400 957 aaKnown RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 ATF7P17544 494 aaPredicted RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 RBM10P98175 930 aaKnown RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 UBE3AQ05086 875 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 VN1R2Q8NFZ6 395 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 ATP8B4Q8TF62 1192 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 ASIC4Q96FT7 647 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
PDCD6-203ENST00000505526 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
PDCD6-203ENST00000505526 NFASCO94856 1347 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 KMT2EQ8IZD2 1858 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 POTEMA6NI47 508 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 CHMP2AO43633 222 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 LONP1P36776 959 aaKnown RBP17.53■□□□□ 0.4
PDCD6-203ENST00000505526 VCPP55072 806 aaKnown RBP17.53■□□□□ 0.4
PDCD6-203ENST00000505526 KRT76Q01546 638 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
PDCD6-203ENST00000505526 PLCB4Q15147 1175 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 NME8Q8N427 588 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 IGSF22Q8N9C0 903 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 SUSD6Q92537 303 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 FAM86C1Q9NVL1 165 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
PDCD6-203ENST00000505526 SMIM35A0A1B0GVV1 85 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 FSD2A1L4K1 749 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 GOLGA6L4A6NEF3 574 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-203ENST00000505526 MCM4P33991 863 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 PPP2R5CQ13362 524 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 DUSP6Q16828 381 aa17.52■□□□□ 0.4
PDCD6-203ENST00000505526 ADALQ6DHV7 355 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms