RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PRPF31Q8WWY3 499 aaKnown RBP5.49□□□□□ -1.53
LMNB1-208ENST00000504788 DDX12PQ92771 950 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 TMEM143Q96AN5 459 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 DHX58Q96C10 678 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 CALML4Q96GE6 196 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 CCDC113Q9H0I3 377 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 PRO3102Q9H379 93 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 AGO3Q9H9G7 860 aaKnown RBP5.49□□□□□ -1.53
LMNB1-208ENST00000504788 DACT1Q9NYF0 836 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 ARHGAP28Q9P2N2 729 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 ODF2LQ9ULJ1 636 aa5.49□□□□□ -1.53
LMNB1-208ENST00000504788 SFI1A8K8P3 1242 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 GAS2O43903 313 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PQBP1O60828 265 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 HIP1RO75146 1068 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CAND2O75155 1236 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 VTNP04004 478 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CLTBP09497 229 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 STAT6P42226 847 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CASP5P51878 434 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 EPHB4P54760 987 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PTENP60484 403 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TBC1D8BQ0IIM8 1120 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 LAMTOR4Q0VGL1 99 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 EPM2AIP1Q7L775 607 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CKAP2LQ8IYA6 745 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 KIAA0895Q8NCT3 520 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CAGE1Q8TC20 777 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 HS3ST6Q96QI5 342 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 MED15Q96RN5 788 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ST6GALNAC4Q9H4F1 302 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 MAGEF1Q9HAY2 307 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ATP6V0A4Q9HBG4 840 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 OLFML3Q9NRN5 406 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TMEM63CQ9P1W3 806 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CCDC39Q9UFE4 941 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SQORQ9Y6N5 450 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FNDC1Q4ZHG4 1894 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ZMYM2Q9UBW7 1377 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 RALGAPA2Q2PPJ7 1873 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 A0A087WZ62 844 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ARHGEF35A5YM69 484 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FAM189A1O60320 539 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TIMP1P01033 207 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 GNAT1P11488 350 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 HOXA11P31270 313 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 NPTX2P47972 431 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 POLGP54098 1239 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 NLRP11P59045 1033 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 MRPS6P82932 125 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 MBTD1Q05BQ5 628 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 KCNA1Q09470 495 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 RAD51AP2Q09MP3 1159 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TMEM62Q0P6H9 643 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 STK4Q13043 487 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PNOCQ13519 176 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 LPIN1Q14693 890 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ZRSR1Q15695 479 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PLEKHG4Q58EX7 1191 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FAM47CQ5HY64 1035 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FBXO47Q5MNV8 452 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 RASIP1Q5U651 963 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 IER5Q5VY09 327 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SLC39A4Q6P5W5 647 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SV2BQ7L1I2 683 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 DYMQ7RTS9 669 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FAM228AQ86W67 206 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 GPBP1Q86WP2 473 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 NME8Q8N427 588 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TMEM161BQ8NDZ6 487 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 MCPH1Q8NEM0 835 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SPIRE2Q8WWL2 714 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 LINC01599Q8WXQ3 324 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SLC7A3Q8WY07 619 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 HPS3Q969F9 1004 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 GBP4Q96PP9 640 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FDXACB1Q9BRP7 624 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 KIFC3Q9BVG8 833 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TIPINQ9BVW5 301 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 CELF4Q9BZC1 486 aaKnown RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 HAPLN2Q9GZV7 340 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 POLR3FQ9H1D9 316 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 BLZF1Q9H2G9 400 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 TMX1Q9H3N1 280 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FZD8Q9H461 694 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 C17orf75Q9HAS0 396 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PTPRHQ9HD43 1115 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 FAM13BQ9NYF5 915 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 SUCLA2Q9P2R7 463 aaPredicted RBP5.48□□□□□ -1.53
LMNB1-208ENST00000504788 USP25Q9UHP3 1055 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 ATP11BQ9Y2G3 1177 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 PCDHA5Q9Y5H7 936 aa5.48□□□□□ -1.53
LMNB1-208ENST00000504788 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms