RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
RNF4-206ENST00000504782 A0A0U1RQF3 1178 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 BTBD18B2RXH4 712 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 FSCN2O14926 492 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 NCK2O43639 380 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 P4HBP07237 508 aaKnown RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 XBP1P17861 261 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 KRT2P35908 639 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 NDUFV1P49821 464 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 CTTNQ14247 550 aaKnown RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 SMAD2Q15796 467 aaKnown RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 NCAPH2Q6IBW4 605 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 EFHBQ8N7U6 833 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 MICAL1Q8TDZ2 1067 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 LPPQ93052 612 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 TMEM143Q96AN5 459 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 NLRP4Q96MN2 994 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 GCOM2Q9BZD3 368 aaPredicted RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 IFT122Q9HBG6 1241 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 TLR9Q9NR96 1032 aa14.34□□□□□ -0.11
RNF4-206ENST00000504782 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
RNF4-206ENST00000504782 A0A087WWV3 80 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
RNF4-206ENST00000504782 EPHA7Q15375 998 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 KCNT2Q6UVM3 1135 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 CEP170P1Q96L14 293 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 LXNQ9BS40 222 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 MINDY3Q9H8M7 445 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 CD207Q9UJ71 328 aa14.33□□□□□ -0.12
RNF4-206ENST00000504782 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 NT5C1B-RDH14C9J2C7 533 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 TBX3O15119 743 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 SLITRK3O94933 977 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 LAG3P18627 525 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 PHKA2P46019 1235 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 DNM2P50570 870 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 SMAD4Q13485 552 aaKnown RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 PLPP4Q5VZY2 271 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 FAM43BQ6ZT52 329 aaPredicted RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 ADHFE1Q8IWW8 467 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 ZNF710Q8N1W2 664 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 PRPF31Q8WWY3 499 aaKnown RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 WASF1Q92558 559 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 DHX33Q9H6R0 707 aaKnown RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 TLE6Q9H808 572 aa14.32□□□□□ -0.12
RNF4-206ENST00000504782 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 PIN4Q9Y237 131 aaKnown RBP14.32□□□□□ -0.12
RNF4-206ENST00000504782 MARCH6O60337 910 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 B4GALT3O60512 393 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 GPR37L1O60883 481 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 EOMESO95936 686 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 SRGAP2CP0DJJ0 459 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 YWHABP31946 246 aaKnown RBP14.31□□□□□ -0.12
RNF4-206ENST00000504782 PLCB3Q01970 1234 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 UBE3AQ05086 875 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 DUSP6Q16828 381 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 TMEM31Q5JXX7 168 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
RNF4-206ENST00000504782 ZNF410Q86VK4 478 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 TMEM173Q86WV6 379 aaPredicted RBP14.31□□□□□ -0.12
RNF4-206ENST00000504782 TPH2Q8IWU9 490 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 C4orf19Q8IY42 314 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
RNF4-206ENST00000504782 ABI1Q8IZP0 508 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 LRRC43Q8N309 656 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 COL4A3BPQ9Y5P4 624 aa14.31□□□□□ -0.12
RNF4-206ENST00000504782 HOXA2O43364 376 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 EYA4O95677 639 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 SFPQP23246 707 aaKnown RBP eCLIP14.3□□□□□ -0.12
RNF4-206ENST00000504782 AFF1P51825 1210 aaKnown RBP14.3□□□□□ -0.12
RNF4-206ENST00000504782 POLGP54098 1239 aaPredicted RBP14.3□□□□□ -0.12
RNF4-206ENST00000504782 LAMTOR4Q0VGL1 99 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 COASYQ13057 564 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 KCNC3Q14003 757 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 XKR9Q5GH70 373 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 CATSPER4Q7RTX7 472 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 SLC39A11Q8N1S5 342 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 SMRP1Q8NCR6 262 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 BCL7CQ8WUZ0 217 aaPredicted RBP14.3□□□□□ -0.12
RNF4-206ENST00000504782 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
RNF4-206ENST00000504782 APOL5Q9BWW9 433 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 TMEM60Q9H2L4 133 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 XPNPEP1Q9NQW7 623 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 FAM105AQ9NUU6 356 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 DACT1Q9NYF0 836 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
RNF4-206ENST00000504782 OFD1O75665 1012 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
RNF4-206ENST00000504782 ATP2B1P20020 1258 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms