RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TYW1Q9NV66 732 aaKnown RBP11.46□□□□□ -0.57
TPM3-217ENST00000504663 DMAC2Q9NW81 257 aa11.46□□□□□ -0.57
TPM3-217ENST00000504663 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
TPM3-217ENST00000504663 IFNKQ9P0W0 207 aa11.46□□□□□ -0.57
TPM3-217ENST00000504663 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
TPM3-217ENST00000504663 LRRC10BA6NIK2 292 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 H3BRB1 525 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 PDXKO00764 312 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 SLC16A4O15374 487 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 ADCY3O60266 1144 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 GNRH1P01148 92 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 HMGCRP04035 888 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 POLGP54098 1239 aaPredicted RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 PURAQ00577 322 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 CCDC173Q0VFZ6 552 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 KIF22Q14807 665 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 PTPN21Q16825 1174 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 ZNF484Q5JVG2 852 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 MIIPQ5JXC2 388 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 HAUS6Q7Z4H7 955 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 LRRC71Q8N4P6 559 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 NOC3LQ8WTT2 800 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 EEF2KMTQ96G04 330 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 CCDC43Q96MW1 224 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 SRRTQ9BXP5 876 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
TPM3-217ENST00000504663 LARSQ9P2J5 1176 aaKnown RBP11.45□□□□□ -0.58
TPM3-217ENST00000504663 MBLAC1A4D2B0 266 aaPredicted RBP11.44□□□□□ -0.58
TPM3-217ENST00000504663 KCNJ18B7U540 433 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 TEX33O43247 280 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 GJB1P08034 283 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 CST5P28325 142 aaPredicted RBP11.44□□□□□ -0.58
TPM3-217ENST00000504663 NAMPTP43490 491 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 CLCN3P51790 818 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 COPB1P53618 953 aaKnown RBP11.44□□□□□ -0.58
TPM3-217ENST00000504663 MCCD1P59942 119 aaPredicted RBP11.44□□□□□ -0.58
TPM3-217ENST00000504663 ALCAMQ13740 583 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 KCNJ12Q14500 433 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 NR1I3Q14994 352 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 GRIK4Q16099 956 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 FSCN1Q16658 493 aaKnown RBP11.44□□□□□ -0.58
TPM3-217ENST00000504663 C12orf56Q8IXR9 622 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 ZSWIM2Q8NEG5 633 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 PPP1R13LQ8WUF5 828 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 LMBR1Q8WVP7 490 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 HVCN1Q96D96 273 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 BORCS6Q96GS4 357 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 ARID3AQ99856 593 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 AGPAT3Q9NRZ7 376 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 PTCH2Q9Y6C5 1203 aa11.44□□□□□ -0.58
TPM3-217ENST00000504663 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 ANKRD63C9JTQ0 380 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 RBAK-RBAKDNI3L0D1 243 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 GAS2O43903 313 aaKnown RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 PIGRP01833 764 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 INHAP05111 366 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 EEF1GP26641 437 aaKnown RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 ADSSP30520 456 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 CASP4P49662 377 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 PSEN2P49810 448 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 CPT1AP50416 773 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 PRMT2P55345 433 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 TBC1D8BQ0IIM8 1120 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 DMP1Q13316 513 aaPredicted RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 MFSD10Q14728 455 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 IER5Q5VY09 327 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 LHX8Q68G74 356 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 PRPF31Q8WWY3 499 aaKnown RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 SLC7A3Q8WY07 619 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 TRIM5Q9C035 493 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 HAPLN2Q9GZV7 340 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 ZNF215Q9UL58 517 aaPredicted RBP11.43□□□□□ -0.58
TPM3-217ENST00000504663 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 PCDHB13Q9Y5F0 798 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 BRCA2P51587 3418 aa11.43□□□□□ -0.58
TPM3-217ENST00000504663 ANK1P16157 1881 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 GRIN2DO15399 1336 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 PHLPP2Q6ZVD8 1323 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 ABLIM1O14639 778 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 CLIC2O15247 247 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms