RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 APOBRQ0VD83 1088 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 CBX2Q14781 532 aaPredicted RBP10.32□□□□□ -0.76
DHFR-202ENST00000504396 PTPN21Q16825 1174 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 DUSP6Q16828 381 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 ODR4Q5SWX8 454 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 FAM102BQ5T8I3 360 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 MTHFD1LQ6UB35 978 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 TRMT1LQ7Z2T5 733 aaKnown RBP10.32□□□□□ -0.76
DHFR-202ENST00000504396 CKAP2LQ8IYA6 745 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 MB21D2Q8IYB1 491 aaPredicted RBP10.32□□□□□ -0.76
DHFR-202ENST00000504396 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 SRBD1Q8N5C6 995 aaKnown RBP10.32□□□□□ -0.76
DHFR-202ENST00000504396 PGBD1Q96JS3 809 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 CDCA3Q99618 268 aaPredicted RBP10.32□□□□□ -0.76
DHFR-202ENST00000504396 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 TCEAL9Q9UHQ7 104 aa10.32□□□□□ -0.76
DHFR-202ENST00000504396 KDM3AQ9Y4C1 1321 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 MGEA5O60502 916 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 FGFR1P11362 822 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 ATF7P17544 494 aaPredicted RBP10.31□□□□□ -0.76
DHFR-202ENST00000504396 LAG3P18627 525 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 CHMLP26374 656 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 KLRC1P26715 233 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 ZNF76P36508 570 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 SLC26A2P50443 739 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 ERVFC1P60507 584 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 FAM160B1Q5W0V3 765 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 PLPPR4Q7Z2D5 763 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 MICU3Q86XE3 530 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 ABI1Q8IZP0 508 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 NME8Q8N427 588 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 COLGALT1Q8NBJ5 622 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 VN1R2Q8NFZ6 395 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 TMEM87BQ96K49 555 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 TCF25Q9BQ70 676 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 MXRA8Q9BRK3 442 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 IRF2BPLQ9H1B7 796 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 ATP6V0A4Q9HBG4 840 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 TYW1Q9NV66 732 aaKnown RBP10.31□□□□□ -0.76
DHFR-202ENST00000504396 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
DHFR-202ENST00000504396 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
DHFR-202ENST00000504396 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
DHFR-202ENST00000504396 SLC12A7Q9Y666 1083 aa10.31□□□□□ -0.76
DHFR-202ENST00000504396 H0Y858 1186 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 GPR182O15218 404 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 SGSM2O43147 1006 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 AVPR2P30518 371 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 MCM5P33992 734 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 NAPAP54920 295 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 KIZQ2M2Z5 673 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 PDE12Q6L8Q7 609 aaKnown RBP10.3□□□□□ -0.76
DHFR-202ENST00000504396 ANKRD54Q6NXT1 300 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 SLC24A5Q71RS6 500 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 METTL13Q8N6R0 699 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 RNF169Q8NCN4 708 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 CYP2W1Q8TAV3 490 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 MAP4K1Q92918 833 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 FOXJ1Q92949 421 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 OSMRQ99650 979 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 ERVK-5Q9HDB9 667 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 RGS18Q9NS28 235 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 ST3GAL5Q9UNP4 418 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 NR2E1Q9Y466 385 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 NFASCO94856 1347 aa10.3□□□□□ -0.76
DHFR-202ENST00000504396 SH2B2O14492 632 aaPredicted RBP10.29□□□□□ -0.76
DHFR-202ENST00000504396 HBP1O60381 514 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 PDGFBP01127 241 aaPredicted RBP10.29□□□□□ -0.76
DHFR-202ENST00000504396 ARP10275 920 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 PBX3P40426 434 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 LIFRP42702 1097 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 ADCY7P51828 1080 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 KRT17Q04695 432 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 ITGB3BPQ13352 177 aaPredicted RBP10.29□□□□□ -0.76
DHFR-202ENST00000504396 MTMR3Q13615 1198 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 SYNE3Q6ZMZ3 975 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 TMC7Q7Z402 723 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 TMEM87AQ8NBN3 555 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 ATP8B4Q8TF62 1192 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 TMEM40Q8WWA1 233 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 SUSD6Q92537 303 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
DHFR-202ENST00000504396 ASIC4Q96FT7 647 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 SCLT1Q96NL6 688 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 ANO3Q9BYT9 981 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
DHFR-202ENST00000504396 ZNF302Q9NR11 478 aa10.29□□□□□ -0.76
DHFR-202ENST00000504396 TRIOO75962 3097 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 C9IYK1 514 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 FOSP01100 380 aaPredicted RBP10.28□□□□□ -0.76
DHFR-202ENST00000504396 VTNP04004 478 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 CEP55Q53EZ4 464 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 CES5AQ6NT32 575 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 MIS18BP1Q6P0N0 1132 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms