RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 INPPL1O15357 1258 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 RETP07949 1114 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 LAMP2P13473 410 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 KLRC1P26715 233 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 CMASQ8NFW8 434 aaPredicted RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 IGSF21Q96ID5 467 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 PIGSQ96S52 555 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 EMILIN2Q9BXX0 1053 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 MRPL9Q9BYD2 267 aaKnown RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 LTB4R2Q9NPC1 389 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 PRMT8Q9NR22 394 aaPredicted RBP14.37□□□□□ -0.11
LSM6-204ENST00000504181 TICRRQ7Z2Z1 1910 aa14.37□□□□□ -0.11
LSM6-204ENST00000504181 ANHXE9PGG2 379 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 NCLP19338 710 aaKnown RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 MAGEA9P43362 315 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 RING1Q06587 406 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 CSRP2Q16527 193 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 CCDC178Q5BJE1 867 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 SMG7Q92540 1137 aaKnown RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 MYL10Q9BUA6 226 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 RPP25Q9BUL9 199 aaKnown RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 VN1R3Q9BXE9 311 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 OSBPL6Q9BZF3 934 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 RNF41Q9H4P4 317 aaPredicted RBP14.36□□□□□ -0.11
LSM6-204ENST00000504181 MAST4O15021 2626 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
LSM6-204ENST00000504181 SDK1Q7Z5N4 2213 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 RFPL2O75678 378 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
LSM6-204ENST00000504181 CRYBB1P53674 252 aaPredicted RBP14.35□□□□□ -0.11
LSM6-204ENST00000504181 PRKCQQ04759 706 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 SLC35G1Q2M3R5 365 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 SLC44A4Q53GD3 710 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 KDF1Q8NAX2 398 aaPredicted RBP14.35□□□□□ -0.11
LSM6-204ENST00000504181 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
LSM6-204ENST00000504181 MAD2L2Q9UI95 211 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 TTC41PQ6P2S7 1318 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 LOC400499M0QZD8 3231 aa14.35□□□□□ -0.11
LSM6-204ENST00000504181 IGSF10Q6WRI0 2623 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 SRRM3A6NNA2 597 aaPredicted RBP14.34□□□□□ -0.11
LSM6-204ENST00000504181 VTNP04004 478 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 TARSP26639 723 aaKnown RBP14.34□□□□□ -0.11
LSM6-204ENST00000504181 TRAF1Q13077 416 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 CELF5Q8N6W0 485 aaKnown RBP14.34□□□□□ -0.11
LSM6-204ENST00000504181 SMARCC2Q8TAQ2 1214 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 FGF14Q92915 247 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 CDHR1Q96JP9 859 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
LSM6-204ENST00000504181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSM6-204ENST00000504181 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.12
LSM6-204ENST00000504181 NOTCH4Q99466 2003 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 A0A0D9SFI3 127 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 B4E1Z4 1266 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 ITGB5P18084 799 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 STAT5BP51692 787 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 MTMR1Q13613 665 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 AASDHQ4L235 1098 aaPredicted RBP14.33□□□□□ -0.12
LSM6-204ENST00000504181 PARM1Q6UWI2 310 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.33□□□□□ -0.12
LSM6-204ENST00000504181 JPH1Q9HDC5 661 aaPredicted RBP14.33□□□□□ -0.12
LSM6-204ENST00000504181 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 SLC9A2Q9UBY0 812 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 EML5Q05BV3 1969 aa14.33□□□□□ -0.12
LSM6-204ENST00000504181 HELZ2Q9BYK8 2649 aaKnown RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 C2CD2LO14523 706 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 GPR32O75388 356 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 GALTP07902 379 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 TDGF1P13385 188 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 MTAPQ13126 283 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 OTUD7AQ8TE49 926 aaPredicted RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 CLDN23Q96B33 292 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 ZNF707Q96C28 371 aaPredicted RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 RHOBTB2Q9BYZ6 727 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 GBP3Q9H0R5 595 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 NRDE2Q9H7Z3 1164 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
LSM6-204ENST00000504181 DNAJB4Q9UDY4 337 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 COL4A2P08572 1712 aa14.32□□□□□ -0.12
LSM6-204ENST00000504181 PNMA6FA0A0J9YX94 578 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 TM4SF5O14894 197 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 LILRB3O75022 631 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 SPATA31D3P0C874 917 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 RPS9P46781 194 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms