RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 TBX10O75333 385 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 MMP1P03956 469 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 ITGB1P05556 798 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 NR5A1Q13285 461 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
MED28-203ENST00000503945 HFE2Q6ZVN8 426 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 ADGRD2Q7Z7M1 963 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 POF1BQ8WVV4 589 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 TMEM117Q9H0C3 514 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 ZSWIM4Q9H7M6 989 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
MED28-203ENST00000503945 MUTYHQ9UIF7 546 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 TRIOO75962 3097 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 A0A087WZ62 844 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 FGFR1P11362 822 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 MRE11P49959 708 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 NHLH1Q02575 133 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 UBE3AQ05086 875 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 DRP2Q13474 957 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 EARS2Q5JPH6 523 aaKnown RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 NCAPH2Q6IBW4 605 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 TPH2Q8IWU9 490 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 NSUN7Q8NE18 718 aaKnown RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 VAV3Q9UKW4 847 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 TECTAO75443 2155 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 PIEZO1Q92508 2521 aa13.38□□□□□ -0.27
MED28-203ENST00000503945 FNDC1Q4ZHG4 1894 aaPredicted RBP13.38□□□□□ -0.27
MED28-203ENST00000503945 ASAP2O43150 1006 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 SLITRK3O94933 977 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 LARGE1O95461 756 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 SRGAP2CP0DJJ0 459 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 SKIP12755 728 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 FGFR4P22455 802 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 SFPQP23246 707 aaKnown RBP eCLIP13.37□□□□□ -0.27
MED28-203ENST00000503945 YWHABP31946 246 aaKnown RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 NDUFV1P49821 464 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 NPEPPSP55786 919 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 KRT17Q04695 432 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 CALCRLQ16602 461 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 DIS3L2Q8IYB7 885 aaKnown RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 MSLNLQ96KJ4 702 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
MED28-203ENST00000503945 CASD1Q96PB1 797 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 TLE6Q9H808 572 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
MED28-203ENST00000503945 JAK2O60674 1132 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 FGF18O76093 207 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 EYA4O95677 639 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 LAG3P18627 525 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 RFC5P40937 340 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 TXKP42681 527 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 TWF2Q6IBS0 349 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 CATSPER4Q7RTX7 472 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 PRPF31Q8WWY3 499 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 EDAQ92838 391 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 TNFRSF25Q93038 417 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 LXNQ9BS40 222 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 CWH43Q9H720 699 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
MED28-203ENST00000503945 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
MED28-203ENST00000503945 WDFY4Q6ZS81 3184 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 NRIP1P48552 1158 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 ALDH7A1P49419 539 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 FOSBP53539 338 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 PLCB3Q01970 1234 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms