RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MASTLQ96GX5 879 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 FAM20AQ96MK3 541 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SAR1BQ9Y6B6 198 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BTBD11A6QL63 1104 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 GAS2O43903 313 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BAG3O95817 575 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 IDO1P14902 403 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ACTN3Q08043 901 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ILF2Q12905 390 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MRPL58Q14197 206 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SPATA21Q7Z572 469 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PARP9Q8IXQ6 854 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 IFT20Q8IY31 132 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 B4GALNT2Q8NHY0 566 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SH3TC2Q8TF17 1288 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BCL7CQ8WUZ0 217 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 RAPGEF4Q8WZA2 1011 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NELL1Q92832 810 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 GREM2Q9H772 168 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TLR7Q9NYK1 1049 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 STOML1Q9UBI4 398 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 LCMT1Q9UIC8 334 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 WWC3Q9ULE0 1092 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 B4DLN1 442 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 E7EWF7 191 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PENKP01210 267 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CPA3P15088 417 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PLCG2P16885 1265 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 HSPA6P17066 643 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CALB2P22676 271 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PDE6CP51160 858 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF268Q14587 947 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 LACTB2Q53H82 288 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ACBD5Q5T8D3 534 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 LRRC38Q5VT99 294 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 FOXD4L5Q5VV16 416 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CYB5D1Q6P9G0 228 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CYP4V2Q6ZWL3 525 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 FOXD4L4Q8WXT5 416 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CELF1Q92879 486 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 BRF1Q92994 677 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZKSCAN4Q969J2 545 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RILPL2Q969X0 211 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 TRAPPC9Q96Q05 1148 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 IWS1Q96ST2 819 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PDP2Q9P2J9 529 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 MAD2L2Q9UI95 211 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 C15orf41Q9Y2V0 281 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SLC4A7Q9Y6M7 1214 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 EIF3DO15371 548 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RPA1P27694 616 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KRT9P35527 623 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SLC26A2P50443 739 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ACVR1Q04771 509 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RNASELQ05823 741 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KLC1Q07866 573 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 GJC2Q5T442 439 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 NAIF1Q69YI7 327 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KDM7AQ6ZMT4 941 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ARHGAP22Q7Z5H3 698 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PSTKQ8IV42 348 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 EZH1Q92800 747 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RBM33Q96EV2 1170 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZMAT2Q96NC0 199 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 OLFM3Q96PB7 478 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 TCHPQ9BT92 498 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 EPN3Q9H201 632 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZFATQ9P243 1243 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SERTM1A2A2V5 107 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC162PA2VCL2 907 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 C5orf67F2Z3F1 127 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 STXBP3O00186 592 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZMYND10O75800 440 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PRPF6O94906 941 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PFKLP17858 780 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 FNTAP49354 379 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ACADVLP49748 655 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 NAP1L1P55209 391 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 TNNC1P63316 161 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PSMD2Q13200 908 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SAFBQ15424 915 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC152Q4G0S7 254 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC92Q53HC0 331 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 AFMIDQ63HM1 303 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SYDE1Q6ZW31 735 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CPLX4Q7Z7G2 160 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PASD1Q8IV76 773 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RNF138Q8WVD3 245 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 C11orf24Q96F05 449 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 HIC2Q96JB3 615 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SIL1Q9H173 461 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CSNK1G1Q9HCP0 422 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SSU72Q9NP77 194 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SAMD15Q9P1V8 674 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PPT2Q9UMR5 302 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 WDR37Q9Y2I8 494 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 RRP7AQ9Y3A4 280 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 MAFBQ9Y5Q3 323 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ADGRG1Q9Y653 693 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms