RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
SCLT1-205ENST00000503401 ARSHQ5FYA8 562 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 CCDC73Q6ZRK6 1079 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 GPBP1Q86WP2 473 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 KCTD17Q8N5Z5 321 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 HERVK_113Q902F9 699 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 GCOM2Q9BZD3 368 aaPredicted RBP18.29■□□□□ 0.52
SCLT1-205ENST00000503401 HIP1RO75146 1068 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 MXD4Q14582 209 aaPredicted RBP18.28■□□□□ 0.52
SCLT1-205ENST00000503401 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 ZNF410Q86VK4 478 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 USP38Q8NB14 1042 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 DHX58Q96C10 678 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 MINDY3Q9H8M7 445 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 STK17AQ9UEE5 414 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 ST3GAL5Q9UNP4 418 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 SQORQ9Y6N5 450 aa18.28■□□□□ 0.52
SCLT1-205ENST00000503401 A0A1B0GVL5 298 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 SFI1A8K8P3 1242 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 ASAP2O43150 1006 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 CDC42EP1Q00587 391 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 IKBKEQ14164 716 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCLT1-205ENST00000503401 DAW1Q8N136 415 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 ZNF710Q8N1W2 664 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 TMX1Q9H3N1 280 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 ERVK-5Q9HDB9 667 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 FAM13BQ9NYF5 915 aa18.27■□□□□ 0.52
SCLT1-205ENST00000503401 CDH23Q9H251 3354 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 POLR2DO15514 142 aaKnown RBP18.27■□□□□ 0.51
SCLT1-205ENST00000503401 MAPK7Q13164 816 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 RASIP1Q5U651 963 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 FAM109BQ6ICB4 259 aaPredicted RBP18.27■□□□□ 0.51
SCLT1-205ENST00000503401 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.51
SCLT1-205ENST00000503401 STAMQ92783 540 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 APBB2Q92870 758 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 KIFC3Q9BVG8 833 aa18.27■□□□□ 0.51
SCLT1-205ENST00000503401 GBF1Q92538 1859 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 GPR182O15218 404 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 MGEA5O60502 916 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 PFKFB1P16118 471 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 CMA1P23946 247 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 GUCY2CP25092 1073 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 WDR5P61964 334 aaKnown RBP18.26■□□□□ 0.51
SCLT1-205ENST00000503401 DEFB103AP81534 67 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 TFDP1Q14186 410 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 E2F4Q16254 413 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 LINC01599Q8WXQ3 324 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 KIFAP3Q92845 792 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 KCNH3Q9ULD8 1083 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 SLC4A7Q9Y6M7 1214 aa18.26■□□□□ 0.51
SCLT1-205ENST00000503401 ABHD14A-ACY1A0A1B0GW23 586 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-205ENST00000503401 GRXCR1A8MXD5 290 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 BAIAP3O94812 1187 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 IBSPP21815 317 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-205ENST00000503401 PHKA2P46019 1235 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 PTENP60484 403 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 SV2BQ7L1I2 683 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 DYMQ7RTS9 669 aa18.25■□□□□ 0.51
SCLT1-205ENST00000503401 RTN4RL1Q86UN2 441 aaPredicted RBP18.25■□□□□ 0.51
SCLT1-205ENST00000503401 MTIF3Q9H2K0 278 aaKnown RBP18.25■□□□□ 0.51
SCLT1-205ENST00000503401 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 MYMKA6NI61 221 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 INO80B-WBP1J3KQ70 363 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 KRT18P05783 430 aaKnown RBP18.24■□□□□ 0.51
SCLT1-205ENST00000503401 KCNJ6P48051 423 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 PEX3P56589 373 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 CATSPER4Q7RTX7 472 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 FSIP1Q8NA03 581 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 IQUBQ8NA54 791 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 IFT74Q96LB3 600 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 INO80BQ9C086 356 aaPredicted RBP18.24■□□□□ 0.51
SCLT1-205ENST00000503401 GOLPH3LQ9H4A5 285 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 KCND2Q9NZV8 630 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 ADGRA3Q8IWK6 1321 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 CHD7Q9P2D1 2997 aa18.24■□□□□ 0.51
SCLT1-205ENST00000503401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
SCLT1-205ENST00000503401 A0A1W2PPC1 479 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 CCDC169A6NNP5 214 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 SFPQP23246 707 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCLT1-205ENST00000503401 NDUFA8P51970 172 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 GIT2Q14161 759 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 SRGAP1Q7Z6B7 1085 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 TIPINQ9BVW5 301 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 TTC3P53804 2025 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 ENPP3O14638 875 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
SCLT1-205ENST00000503401 LIG1P18858 919 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 NAMPTP43490 491 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 NPTX2P47972 431 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 DMP1Q13316 513 aaPredicted RBP18.23■□□□□ 0.51
SCLT1-205ENST00000503401 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 FAM117BQ6P1L5 589 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 DEPTORQ8TB45 409 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms