RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 C14orf119Q9NWQ9 140 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 RTEL1Q9NZ71 1219 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 RAPGEFL1Q9UHV5 662 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 TMPRSS11EQ9UL52 423 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 FAM184BQ9ULE4 1060 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 PCDHB6Q9Y5E3 794 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 ALG1L2C9J202 215 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 PRICKLE3O43900 615 aaPredicted RBP7.9□□□□□ -1.14
NIPBL-203ENST00000503274 H2AFYO75367 372 aaKnown RBP7.9□□□□□ -1.14
NIPBL-203ENST00000503274 GUCY2FP51841 1108 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 SCAND1P57086 179 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 FSCN1Q16658 493 aaKnown RBP7.9□□□□□ -1.14
NIPBL-203ENST00000503274 USP30Q70CQ3 517 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 CMIPQ8IY22 773 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 CDYL2Q8N8U2 506 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 LMBR1Q8WVP7 490 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 RSAD2Q8WXG1 361 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 NKD2Q969F2 451 aaPredicted RBP7.9□□□□□ -1.14
NIPBL-203ENST00000503274 WDR92Q96MX6 357 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 DNAI1Q9UI46 699 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 USP18Q9UMW8 372 aa7.9□□□□□ -1.14
NIPBL-203ENST00000503274 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 EVA1CP58658 441 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 ADAM15Q13444 863 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 NFYCQ13952 458 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 UGT8Q16880 541 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 PITRM1Q5JRX3 1037 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 LYSMD2Q8IV50 215 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 CNTD1Q8N815 330 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 EAF2Q96CJ1 260 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-203ENST00000503274 C20orf173Q96LM9 149 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 JADE2Q9NQC1 790 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 PRSS50Q9UI38 385 aa7.89□□□□□ -1.15
NIPBL-203ENST00000503274 ZNF536O15090 1300 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 hCG_2014768A0A024R1R8 64 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 A0A0A6YYK5 440 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-203ENST00000503274 K7ESF4 209 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 ARHGAP6O43182 974 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 CNOT4O95628 575 aaKnown RBP7.88□□□□□ -1.15
NIPBL-203ENST00000503274 LPLP06858 475 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 ENPP1P22413 925 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 GPR15P49685 360 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 EPHB4P54760 987 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 ERVK-21P61565 698 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 FAM50AQ14320 339 aaKnown RBP7.88□□□□□ -1.15
NIPBL-203ENST00000503274 TBR1Q16650 682 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-203ENST00000503274 LPPQ93052 612 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 SOX7Q9BT81 388 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 MENTQ9BUN1 341 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 SEC61A2Q9H9S3 476 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 NR2E1Q9Y466 385 aa7.88□□□□□ -1.15
NIPBL-203ENST00000503274 CTDP1Q9Y5B0 961 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-203ENST00000503274 PLATP00750 562 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 RAC3P60763 192 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 PPARAQ07869 468 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 TRIM25Q14258 630 aaKnown RBP7.87□□□□□ -1.15
NIPBL-203ENST00000503274 NFIXQ14938 502 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 MAN2A1Q16706 1144 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 CCDC178Q5BJE1 867 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 TGFBRAP1Q8WUH2 860 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 ORAI2Q96SN7 254 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 TRIM8Q9BZR9 551 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 KCTD10Q9H3F6 313 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 PRDM12Q9H4Q4 367 aa7.87□□□□□ -1.15
NIPBL-203ENST00000503274 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 DAPK3O43293 454 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 NRP2O60462 931 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 FSBPO95073 299 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 CELA3BP08861 270 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 HNRNPLP14866 589 aaKnown RBP eCLIP7.86□□□□□ -1.153e-7■■■■□ 22.4
NIPBL-203ENST00000503274 XPAP23025 273 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-203ENST00000503274 CTSWP56202 376 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 ANAPC15P60006 121 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.86□□□□□ -1.15
NIPBL-203ENST00000503274 SLFN13Q68D06 897 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 SLC41A1Q8IVJ1 513 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 OR14K1Q8NGZ2 314 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 OR14C36Q8NHC7 312 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 PPP1R14CQ8TAE6 165 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 GCDHQ92947 438 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-203ENST00000503274 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 LMF1Q96S06 567 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 KRTAP4-11Q9BYQ6 195 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.86□□□□□ -1.15
NIPBL-203ENST00000503274 EDARQ9UNE0 448 aa7.86□□□□□ -1.15
NIPBL-203ENST00000503274 C2orf78A6NCI8 922 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 KATNA1O75449 491 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 GPR3P46089 330 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 LGALS4P56470 323 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 IGBP1P78318 339 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 HGFACQ04756 655 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 ITKQ08881 620 aa7.85□□□□□ -1.15
NIPBL-203ENST00000503274 KLF1Q13351 362 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-203ENST00000503274 MTMR1Q13613 665 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms