RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TMEM253P0C7T8 217 aa18■□□□□ 0.47
VCAN-204ENST00000502527 RXRBP28702 533 aa18■□□□□ 0.47
VCAN-204ENST00000502527 PLS1Q14651 629 aa18■□□□□ 0.47
VCAN-204ENST00000502527 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
VCAN-204ENST00000502527 INTS8Q75QN2 995 aaKnown RBP18■□□□□ 0.47
VCAN-204ENST00000502527 MREGQ8N565 214 aa18■□□□□ 0.47
VCAN-204ENST00000502527 METTL13Q8N6R0 699 aa18■□□□□ 0.47
VCAN-204ENST00000502527 EIF1ADQ8N9N8 165 aaKnown RBP18■□□□□ 0.47
VCAN-204ENST00000502527 WHAMMQ8TF30 809 aa18■□□□□ 0.47
VCAN-204ENST00000502527 CASKIN2Q8WXE0 1202 aa18■□□□□ 0.47
VCAN-204ENST00000502527 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
VCAN-204ENST00000502527 ACCSQ96QU6 501 aa18■□□□□ 0.47
VCAN-204ENST00000502527 AGO4Q9HCK5 861 aaKnown RBP18■□□□□ 0.47
VCAN-204ENST00000502527 ZHX2Q9Y6X8 837 aa18■□□□□ 0.47
VCAN-204ENST00000502527 NCANO14594 1321 aa18■□□□□ 0.47
VCAN-204ENST00000502527 ESYT3A0FGR9 886 aa18■□□□□ 0.47
VCAN-204ENST00000502527 ZSCAN5CA6NGD5 496 aaPredicted RBP18■□□□□ 0.47
VCAN-204ENST00000502527 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
VCAN-204ENST00000502527 QARSP47897 775 aaKnown RBP18■□□□□ 0.47
VCAN-204ENST00000502527 CETN1Q12798 172 aa18■□□□□ 0.47
VCAN-204ENST00000502527 IL31RAQ8NI17 732 aa18■□□□□ 0.47
VCAN-204ENST00000502527 OLIG1Q8TAK6 271 aa18■□□□□ 0.47
VCAN-204ENST00000502527 VTI1AQ96AJ9 217 aa18■□□□□ 0.47
VCAN-204ENST00000502527 SYT11Q9BT88 431 aa18■□□□□ 0.47
VCAN-204ENST00000502527 GPR88Q9GZN0 384 aa18■□□□□ 0.47
VCAN-204ENST00000502527 MAP3K20Q9NYL2 800 aaKnown RBP18■□□□□ 0.47
VCAN-204ENST00000502527 SAMM50Q9Y512 469 aa18■□□□□ 0.47
VCAN-204ENST00000502527 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 COL4A5P29400 1685 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 CCDC188H7C350 402 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 LYPLA2O95372 231 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 ITGB3BPQ13352 177 aaPredicted RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 MAEAQ7L5Y9 396 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 NT5DC3Q86UY8 548 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 RDH13Q8NBN7 331 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 CTNNBL1Q8WYA6 563 aaPredicted RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 RFFLQ8WZ73 363 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 TBC1D22BQ9NU19 505 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 AMFRQ9UKV5 643 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 PHF20L1A8MW92 1017 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 WNT10BO00744 389 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 P4HA2O15460 535 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 ALAS1P13196 640 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 PLS3P13797 630 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 TNFAIP3P21580 790 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 RARRES1P49788 294 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 MTMR1Q13613 665 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 LRRC31Q6UY01 552 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 RASGEF1CQ8N431 466 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 HES6Q96HZ4 224 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 ZIM3Q96PE6 472 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 TIPINQ9BVW5 301 aa17.99■□□□□ 0.47
VCAN-204ENST00000502527 NOC2LQ9Y3T9 749 aaKnown RBP17.99■□□□□ 0.47
VCAN-204ENST00000502527 FAM153BP0C7A2 387 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
VCAN-204ENST00000502527 CUL1Q13616 776 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 KIF22Q14807 665 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 ARHGAP44Q17R89 818 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 FAM153CQ494X1 144 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 IQCKQ8N0W5 287 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 CPXCR1Q8N123 301 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 LMO3Q8TAP4 145 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 SLC35G2Q8TBE7 412 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 SYTL5Q8TDW5 730 aaPredicted RBP17.98■□□□□ 0.47
VCAN-204ENST00000502527 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
VCAN-204ENST00000502527 ISCUQ9H1K1 167 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 PLEKHA4Q9H4M7 779 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 TAF1DQ9H5J8 278 aaPredicted RBP17.98■□□□□ 0.47
VCAN-204ENST00000502527 FAM153AQ9UHL3 310 aa17.98■□□□□ 0.47
VCAN-204ENST00000502527 KRIT1O00522 736 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 VAMP7P51809 220 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 SNRPFP62306 86 aaKnown RBP17.97■□□□□ 0.47
VCAN-204ENST00000502527 MRPS9P82933 396 aaKnown RBP17.97■□□□□ 0.47
VCAN-204ENST00000502527 PTPROQ16827 1216 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 CAMKK2Q96RR4 588 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 KIAA1683Q9H0B3 1180 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 SLC38A10Q9HBR0 1119 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 LOXHD1Q8IVV2 1947 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 DPEP1P16444 411 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 CXCL9Q07325 125 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 IWS1Q96ST2 819 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 AP1M1Q9BXS5 423 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 ST6GALNAC4Q9H4F1 302 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 PCIF1Q9H4Z3 704 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
VCAN-204ENST00000502527 PNMA2Q9UL42 364 aa17.97■□□□□ 0.47
VCAN-204ENST00000502527 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
VCAN-204ENST00000502527 EMSYQ7Z589 1322 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 FOXN3O00409 490 aaPredicted RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 MAPK13O15264 365 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 SART1O43290 800 aaKnown RBP17.96■□□□□ 0.47
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