RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MCM8Q9UJA3 840 aa4□□□□□ -1.77
RIF1-212ENST00000498041 FAM184BQ9ULE4 1060 aa4□□□□□ -1.77
RIF1-212ENST00000498041 MYRFQ9Y2G1 1151 aa4□□□□□ -1.77
RIF1-212ENST00000498041 PRSS38A1L453 326 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 GPR39O43194 453 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 PCDH8O95206 1070 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 POU3F3P20264 500 aaPredicted RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 MANFP55145 182 aaKnown RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 TMPRSS15P98073 1019 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 ADAM15Q13444 863 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 TBR1Q16650 682 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 MAN2A1Q16706 1144 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 ZBTB41Q5SVQ8 909 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 IQSEC1Q6DN90 963 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 LIMS2Q7Z4I7 341 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 CIR1Q86X95 450 aaPredicted RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 SPATS2Q86XZ4 545 aaKnown RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 NKD2Q969F2 451 aaPredicted RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 LRRC37BQ96QE4 947 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 PTPN18Q99952 460 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 ANO3Q9BYT9 981 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 OSBPL6Q9BZF3 934 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 MEGF9Q9H1U4 602 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 MSL2Q9HCI7 577 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 SRRDQ9UH36 339 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 PUF60Q9UHX1 559 aaKnown RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 DNAI1Q9UI46 699 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 CTDP1Q9Y5B0 961 aaPredicted RBP3.99□□□□□ -1.77
RIF1-212ENST00000498041 PCDHB6Q9Y5E3 794 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 NUMBLQ9Y6R0 609 aa3.99□□□□□ -1.77
RIF1-212ENST00000498041 DAPK3O43293 454 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 PFKMP08237 780 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 CR2P20023 1033 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 GPR15P49685 360 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 HGFACQ04756 655 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 DDX42Q86XP3 938 aaKnown RBP eCLIP3.98□□□□□ -1.77
RIF1-212ENST00000498041 CDYL2Q8N8U2 506 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 SLC16A11Q8NCK7 471 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 OR14K1Q8NGZ2 314 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 RSAD2Q8WXG1 361 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 GCDHQ92947 438 aaPredicted RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 SLC7A6OSQ96CW6 309 aaPredicted RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 LOXL4Q96JB6 756 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 SAMD11Q96NU1 681 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 ACAP3Q96P50 834 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 SSBP3Q9BWW4 388 aaPredicted RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 FAM126AQ9BYI3 521 aaPredicted RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 C12orf65Q9H3J6 166 aaKnown RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 TOPORSQ9NS56 1045 aaPredicted RBP3.98□□□□□ -1.77
RIF1-212ENST00000498041 USP18Q9UMW8 372 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 OAZ3Q9UMX2 235 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 ATP8A1Q9Y2Q0 1164 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 PPP2R3BQ9Y5P8 575 aa3.98□□□□□ -1.77
RIF1-212ENST00000498041 A0A0A6YYK5 440 aaPredicted RBP3.97□□□□□ -1.77
RIF1-212ENST00000498041 PMS2P1A4D2B8 440 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 C2orf78A6NCI8 922 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 MATN2O00339 956 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 GPR42O15529 346 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 NRP2O60462 931 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 FSBPO95073 299 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 CLEC2LP0C7M8 214 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 XPAP23025 273 aaPredicted RBP3.97□□□□□ -1.77
RIF1-212ENST00000498041 MAGEA10P43363 369 aaPredicted RBP3.97□□□□□ -1.77
RIF1-212ENST00000498041 ADAM17P78536 824 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 PDCD1Q15116 288 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 CCDC178Q5BJE1 867 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 CCDC62Q6P9F0 684 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 CLEC14AQ86T13 490 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 TAX1BP1Q86VP1 789 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 GIMAP8Q8ND71 665 aaPredicted RBP3.97□□□□□ -1.77
RIF1-212ENST00000498041 GAB3Q8WWW8 586 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 CFHR4Q92496 578 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 GNRHR2Q96P88 292 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 DPYSL5Q9BPU6 564 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 SOX7Q9BT81 388 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 SLC6A15Q9H2J7 730 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 SMPD4Q9NXE4 827 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 TMPRSS11EQ9UL52 423 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 RBM8AQ9Y5S9 174 aaKnown RBP3.97□□□□□ -1.77
RIF1-212ENST00000498041 PHLDB1Q86UU1 1377 aa3.97□□□□□ -1.77
RIF1-212ENST00000498041 GOLGA8AA7E2F4 631 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 GOLGA8BA8MQT2 603 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 OVOL3O00110 214 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 MATN3O15232 486 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 SLC26A4O43511 780 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 CDC14BO60729 498 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 HNRNPLP14866 589 aaKnown RBP eCLIP3.96□□□□□ -1.78
RIF1-212ENST00000498041 TNFRSF1AP19438 455 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 ENPP1P22413 925 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 RPS19P39019 145 aaKnown RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 ADCY7P51828 1080 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 NRG3P56975 720 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 ATP2C1P98194 919 aaPredicted RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 PPARAQ07869 468 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 TCIRG1Q13488 830 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 FSCN1Q16658 493 aaKnown RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 UGT8Q16880 541 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms