RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MRGPREQ86SM8 312 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 DDX53Q86TM3 631 aaKnown RBP6.01□□□□□ -1.45
SMC4-227ENST00000497984 GSPT2Q8IYD1 628 aaKnown RBP6.01□□□□□ -1.45
SMC4-227ENST00000497984 DYDC2Q96IM9 177 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 WDR92Q96MX6 357 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 C8orf37Q96NL8 207 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 NRDE2Q9H7Z3 1164 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 POLR3BQ9NW08 1133 aaPredicted RBP6.01□□□□□ -1.45
SMC4-227ENST00000497984 TRPS1Q9UHF7 1281 aa6.01□□□□□ -1.45
SMC4-227ENST00000497984 GOLGA8BA8MQT2 603 aa6□□□□□ -1.45
SMC4-227ENST00000497984 E9PSI1 815 aa6□□□□□ -1.45
SMC4-227ENST00000497984 PLD2O14939 933 aa6□□□□□ -1.45
SMC4-227ENST00000497984 FAM20BO75063 409 aa6□□□□□ -1.45
SMC4-227ENST00000497984 SMAD3P84022 425 aaKnown RBP6□□□□□ -1.45
SMC4-227ENST00000497984 MYBPC3Q14896 1274 aa6□□□□□ -1.45
SMC4-227ENST00000497984 FKBP15Q5T1M5 1219 aa6□□□□□ -1.45
SMC4-227ENST00000497984 RHOUQ7L0Q8 258 aa6□□□□□ -1.45
SMC4-227ENST00000497984 CLUHP3Q96NS8 147 aa6□□□□□ -1.45
SMC4-227ENST00000497984 SAMD15Q9P1V8 674 aa6□□□□□ -1.45
SMC4-227ENST00000497984 DNAI1Q9UI46 699 aa6□□□□□ -1.45
SMC4-227ENST00000497984 GRXCR1A8MXD5 290 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 RAPGEF3O95398 923 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 JUNP05412 331 aaKnown RBP5.99□□□□□ -1.45
SMC4-227ENST00000497984 PTX3P26022 381 aaPredicted RBP5.99□□□□□ -1.45
SMC4-227ENST00000497984 EPHA7Q15375 998 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 RABL3Q5HYI8 236 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 PRAMEF9Q5VWM5 478 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 LAIR1Q6GTX8 287 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 MFSD5Q6N075 450 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 ELOA2Q8IYF1 753 aaPredicted RBP5.99□□□□□ -1.45
SMC4-227ENST00000497984 LILRB2Q8N423 598 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 MNTQ99583 582 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 WDR26Q9H7D7 661 aa5.99□□□□□ -1.45
SMC4-227ENST00000497984 PTPDC1A2A3K4 754 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 TMEM191CA6NGB0 347 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 B4E1Z4 1266 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 CYP17A1P05093 508 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 HNRNPLP14866 589 aaKnown RBP eCLIP5.98□□□□□ -1.452e-15■■■■■ 47.4
SMC4-227ENST00000497984 NR4A1P22736 598 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 PROZP22891 400 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 PTGS2P35354 604 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 IGFALSP35858 605 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 BCAR1P56945 870 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 KANSL1Q7Z3B3 1105 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 KIAA1958Q8N8K9 716 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 MDGA1Q8NFP4 955 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 SLC25A43Q8WUT9 341 aaPredicted RBP5.98□□□□□ -1.45
SMC4-227ENST00000497984 HAS1Q92839 578 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 LENG9Q96B70 501 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 ZNF512Q96ME7 567 aaPredicted RBP5.98□□□□□ -1.45
SMC4-227ENST00000497984 TUBGCP5Q96RT8 1024 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 CRAMP1Q96RY5 1269 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 PITHD1Q9GZP4 211 aaPredicted RBP5.98□□□□□ -1.45
SMC4-227ENST00000497984 PCIF1Q9H4Z3 704 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 RCAN3Q9UKA8 241 aa5.98□□□□□ -1.45
SMC4-227ENST00000497984 DNAJC8O75937 253 aaPredicted RBP5.97□□□□□ -1.45
SMC4-227ENST00000497984 CREB3L3Q68CJ9 461 aa5.97□□□□□ -1.45
SMC4-227ENST00000497984 NAIF1Q69YI7 327 aaPredicted RBP5.97□□□□□ -1.45
SMC4-227ENST00000497984 KRT40Q6A162 431 aa5.97□□□□□ -1.45
SMC4-227ENST00000497984 ESRP1Q6NXG1 681 aaKnown RBP5.97□□□□□ -1.45
SMC4-227ENST00000497984 NME9Q86XW9 330 aa5.97□□□□□ -1.45
SMC4-227ENST00000497984 MB21D1Q8N884 522 aa5.97□□□□□ -1.45
SMC4-227ENST00000497984 ATXN2LQ8WWM7 1075 aaKnown RBP5.97□□□□□ -1.45
SMC4-227ENST00000497984 PGBD4Q96DM1 585 aa5.97□□□□□ -1.45
SMC4-227ENST00000497984 A0A0A6YYJ9 748 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 GOLGA6L6A8MZA4 724 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 H7C1D1 291 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 MTSS1O43312 755 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 MFAP3LO75121 409 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 STC2O76061 302 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 ASLP04424 464 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 ADRA1BP35368 520 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 KIR2DL3P43628 341 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 FSTL1Q12841 308 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 SPIDRQ14159 915 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 ZNF460Q14592 562 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 FNDC3BQ53EP0 1204 aaKnown RBP5.96□□□□□ -1.46
SMC4-227ENST00000497984 CMTM4Q8IZR5 234 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 ZNF276Q8N554 614 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 RPGRQ92834 1020 aaKnown RBP5.96□□□□□ -1.46
SMC4-227ENST00000497984 C14orf93Q9H972 538 aaKnown RBP5.96□□□□□ -1.46
SMC4-227ENST00000497984 B4GALT6Q9UBX8 382 aa5.96□□□□□ -1.46
SMC4-227ENST00000497984 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.46
SMC4-227ENST00000497984 A0A0A6YYK5 440 aaPredicted RBP5.95□□□□□ -1.46
SMC4-227ENST00000497984 PPFIA2O75334 1257 aa5.95□□□□□ -1.46
SMC4-227ENST00000497984 IPO13O94829 963 aaKnown RBP5.95□□□□□ -1.46
SMC4-227ENST00000497984 ZNF174Q15697 407 aa5.95□□□□□ -1.46
SMC4-227ENST00000497984 MBNL2Q5VZF2 373 aaKnown RBP5.95□□□□□ -1.46
SMC4-227ENST00000497984 ELF4Q99607 663 aaPredicted RBP5.95□□□□□ -1.46
SMC4-227ENST00000497984 SOX7Q9BT81 388 aa5.95□□□□□ -1.46
SMC4-227ENST00000497984 MLST8Q9BVC4 326 aa5.95□□□□□ -1.46
SMC4-227ENST00000497984 CABP5Q9NP86 173 aa5.95□□□□□ -1.46
SMC4-227ENST00000497984 CBX4O00257 560 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 DAPK3O43293 454 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 OPA1O60313 960 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 SLC9A1P19634 815 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 DCAF17Q5H9S7 520 aaPredicted RBP5.94□□□□□ -1.46
SMC4-227ENST00000497984 UNQ6494/PRO21346Q6UXR6 183 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 ST8SIA2Q92186 375 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms