RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	COA7	Q96BR5	231 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UBE2O	Q9C0C9	1292 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RXFP1	Q9HBX9	757 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TFCP2L1	Q9NZI6	479 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GCNT4	Q9P109	453 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MYH1	P12882	1939 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SFI1	A8K8P3	1242 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KLRF2	D3W0D1	207 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ATMIN	O43313	823 aa	Predicted RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UCHL3	P15374	230 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MARCKSL1	P49006	195 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	LRRC63	Q05C16	580 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PRUNE1	Q86TP1	453 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	JDP2	Q8WYK2	163 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KIFAP3	Q92845	792 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SMC6	Q96SB8	1091 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	STOML1	Q9UBI4	398 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ANKRD33B	A6NCL7	494 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PIAS1	O75925	651 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KRT36	O76013	467 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DDAH1	O94760	285 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NOL4	O94818	638 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TPP2	P29144	1249 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CTTN	Q14247	550 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ASTE1	Q2TB18	679 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SNX30	Q5VWJ9	437 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZNF365	Q70YC5	407 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ECHDC2	Q86YB7	292 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C7orf25	Q9BPX7	421 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TBC1D10A	Q9BXI6	508 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NPHS2	Q9NP85	383 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UBN1	Q9NPG3	1134 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	XIRP1	Q702N8	1843 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MON2	Q7Z3U7	1717 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ADCY8	P40145	1251 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CCDC65	Q8IXS2	484 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	REXO1	Q8N1G1	1221 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CCDC24	Q8N4L8	307 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TEX9	Q8N6V9	391 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FAM81A	Q8TBF8	368 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MKNK1	Q9BUB5	465 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CHMP2B	Q9UQN3	213 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DLAT	P10515	647 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CA4	P22748	312 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	IL9R	Q01113	521 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CDR2	Q01850	454 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GSTA5	Q7RTV2	222 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GALNT15	Q8N3T1	639 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C4orf32	Q8N8J7	132 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DDX27	Q96GQ7	796 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ADAM7	Q9H2U9	754 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	EMILIN3	Q9NT22	766 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	USP40	Q9NVE5	1235 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NMRK1	Q9NWW6	199 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TMOD3	Q9NYL9	352 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MTUS1	Q9ULD2	1270 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	HEG1	Q9ULI3	1381 aa		11.41	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MYH7	P12883	1935 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SMAP	O00193	183 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MAPK13	O15264	365 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ATP6V1C1	P21283	382 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GSTT1	P30711	240 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TMEM62	Q0P6H9	643 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	EMC10	Q5UCC4	262 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SCG3	Q8WXD2	468 aa	Known RBP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	4e-6	■■■■□ 24.2
TRAPPC12-223	ENST00000497597	NMD3	Q96D46	503 aa	Known RBP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	BTBD6	Q96KE9	485 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GPCPD1	Q9NPB8	672 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PCMTD2	Q9NV79	361 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZFP69B	Q9UJL9	534 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RGPD1	P0DJD0	1748 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NWD2	Q9ULI1	1742 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ANKRD63	C9JTQ0	380 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UNC5C	O95185	931 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MYL1	P05976	194 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CYP4A11	Q02928	519 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MAPK7	Q13164	816 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UBE2S	Q16763	222 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RFWD3	Q6PCD5	774 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	LRRC55	Q6ZSA7	311 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ARHGEF18	Q6ZSZ5	1173 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NLRP10	Q86W26	655 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KRT35	Q92764	455 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CYP39A1	Q9NYL5	469 aa		11.4	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GOLGA8R	I6L899	631 aa		11.4	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	GYG2	O15488	501 aa		11.4	□□□□□ -0.59

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