RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ANKS1AQ92625 1134 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 STK33Q9BYT3 514 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 ZMAT3Q9HA38 289 aaKnown RBP7.04□□□□□ -1.28
BRCA1-224ENST00000497488 CYP4F12Q9HCS2 524 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 PCOLCE2Q9UKZ9 415 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 ZNF281Q9Y2X9 895 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 CUX2O14529 1486 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 NPHP3-ACAD11A0A0J9YXS1 232 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 A0A1W2PPC4 97 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 SYNDIG1LA6NDD5 238 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 RNF225M0QZC1 329 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 DLL1O00548 723 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 MAN2B1O00754 1011 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 SCDO00767 359 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 DHX16O60231 1041 aaKnown RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 LPLP06858 475 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 XBP1P17861 261 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 PAMP19021 973 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 MAP2K6P52564 334 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 CLNS1AP54105 237 aaKnown RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 DCAF7P61962 342 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 FOXR1Q6PIV2 292 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 CHCHD4Q8N4Q1 142 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 MSL3Q8N5Y2 521 aaKnown RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 TSPEARQ8WU66 669 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 CHAMP1Q96JM3 812 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 TREX2Q9BQ50 279 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 JAM3Q9BX67 310 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 SLC12A9Q9BXP2 914 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 C14orf93Q9H972 538 aaKnown RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 ZNF287Q9HBT7 754 aa7.03□□□□□ -1.28
BRCA1-224ENST00000497488 MAGED1Q9Y5V3 778 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-224ENST00000497488 TRBV23OR9-2A0A075B6M9 112 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 FSD2A1L4K1 749 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 LGALS16A8MUM7 142 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 F5H0A9 414 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 F8W8V4 182 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 SYT5O00445 386 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 NPC1O15118 1278 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 PHGDHO43175 533 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 PARP1P09874 1014 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 GNAT1P11488 350 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 EEF1GP26641 437 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 TUBP50607 506 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 ATXN1P54253 815 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 NAP1L1P55209 391 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 GRM1Q13255 1194 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 ARL13BQ3SXY8 428 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 HABP4Q5JVS0 413 aaKnown RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 FBXO47Q5MNV8 452 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 CPZQ66K79 652 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 MSL1Q68DK7 614 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 ESPNLQ6ZVH7 1005 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 RTN4RL1Q86UN2 441 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 OXR1Q8N573 874 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 GOLGA6L1Q8N7Z2 621 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 IL31RAQ8NI17 732 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 RGMAQ96B86 450 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 SUGCTQ9HAC7 445 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 OBP2BQ9NPH6 170 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 NSMCE4AQ9NXX6 385 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 CLDND1Q9NY35 253 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 OGDHLQ9ULD0 1010 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 TIMM13Q9Y5L4 95 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-224ENST00000497488 FANCD2Q9BXW9 1451 aa7.02□□□□□ -1.29
BRCA1-224ENST00000497488 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 TERTO14746 1132 aaKnown RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 HOXC11O43248 304 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 FTLP02792 175 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ALAS2P22557 587 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 OAS2P29728 719 aaKnown RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 BMP8BP34820 402 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 SERPINF1P36955 418 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 BCL6P41182 706 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 WASP42768 502 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ASPAP45381 313 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 SOX4Q06945 474 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 MEA1Q16626 185 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 FIGNQ5HY92 759 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 KLHDC7AQ5VTJ3 777 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 TREML4Q6UXN2 200 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 DTWD2Q8NBA8 298 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 NRG4Q8WWG1 115 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ZNF566Q969W8 418 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 HVCN1Q96D96 273 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ZMAT2Q96NC0 199 aaKnown RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 FAM167BQ9BTA0 163 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 CNPPD1Q9BV87 410 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 WNT8AQ9H1J5 351 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 KCTD10Q9H3F6 313 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 OLA1Q9NTK5 396 aaKnown RBP7.01□□□□□ -1.29
BRCA1-224ENST00000497488 IRAK4Q9NWZ3 460 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 DPP7Q9UHL4 492 aa7.01□□□□□ -1.29
BRCA1-224ENST00000497488 ITGB1BP2Q9UKP3 347 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms