RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ACBD5Q5T8D3 534 aaPredicted RBP6.62□□□□□ -1.35
GGPS1-208ENST00000497327 RCBTB1Q8NDN9 531 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 MICAL1Q8TDZ2 1067 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 C1orf159Q96HA4 380 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 KAZALD1Q96I82 304 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 DCTPP1Q9H773 170 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 ZNF652Q9Y2D9 606 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 ZBTB1Q9Y2K1 713 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 LAMB4A4D0S4 1761 aa6.62□□□□□ -1.35
GGPS1-208ENST00000497327 CICQ96RK0 1608 aaPredicted RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 MEFVO15553 781 aaPredicted RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 UBTFL1P0CB47 393 aaPredicted RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 IL6STP40189 918 aaPredicted RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 ECI1P42126 302 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 GFRA1P56159 465 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 NUCB1Q02818 461 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 MTX1Q13505 466 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 GCKRQ14397 625 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 KRT27Q7Z3Y8 459 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 ZC3H18Q86VM9 953 aaKnown RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 TXNDC5Q8NBS9 432 aaKnown RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 TRMT2BQ96GJ1 504 aaKnown RBP6.61□□□□□ -1.35
GGPS1-208ENST00000497327 MYD88Q99836 296 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 ISCA1Q9BUE6 129 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
GGPS1-208ENST00000497327 COL15A1P39059 1388 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 N4BP2Q86UW6 1770 aaPredicted RBP6.6□□□□□ -1.35
GGPS1-208ENST00000497327 MAP3K15Q6ZN16 1313 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 TJP1Q07157 1748 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 PNMA6EA0A0J9YXQ4 647 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 MROH6A6NGR9 719 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 ERVV-1B6SEH8 477 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 GRM8O00222 908 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.351e-6■■■■■ 29.4
GGPS1-208ENST00000497327 LCP1P13796 627 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 ZNF28P17035 718 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 CRKLP46109 303 aaKnown RBP6.6□□□□□ -1.35
GGPS1-208ENST00000497327 GTF2A2P52657 109 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 TCIRG1Q13488 830 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.35
GGPS1-208ENST00000497327 SV2CQ496J9 727 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 MCTP2Q6DN12 878 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 SSH3Q8TE77 659 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 TMEM169Q96HH4 297 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 SUCLG2Q96I99 432 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 GPR20Q99678 358 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 PRKAG3Q9UGI9 489 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 INVSQ9Y283 1065 aa6.6□□□□□ -1.35
GGPS1-208ENST00000497327 LRRFIP2Q9Y608 721 aaKnown RBP6.6□□□□□ -1.35
GGPS1-208ENST00000497327 ZNF831Q5JPB2 1677 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 TADA3O75528 432 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 LTBRP36941 435 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 ETFBP38117 255 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 TNNI3KQ59H18 835 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 PPIL6Q8IXY8 311 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 TTC9BQ8N6N2 239 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 CCDC191Q8NCU4 936 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 SAMD11Q96NU1 681 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 HDAC5Q9UQL6 1122 aa6.59□□□□□ -1.35
GGPS1-208ENST00000497327 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 RREB1Q92766 1687 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 TCRBV5S2A0A599 114 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 H7BY64 318 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 MYO1BO43795 1136 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 HMMRO75330 724 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CAMTA2O94983 1202 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CPP00450 1065 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 KIAA2012Q0VF49 1180 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 HLFQ16534 295 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 RABL6Q3YEC7 729 aaPredicted RBP6.58□□□□□ -1.36
GGPS1-208ENST00000497327 EPHA10Q5JZY3 1008 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 SLC35F1Q5T1Q4 408 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 PPP1R42Q7Z4L9 355 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CHD1LQ86WJ1 897 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 ZNF34Q8IZ26 560 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 LGI4Q8N135 537 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CCDC140Q96MF4 163 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 C1QTNF3Q9BXJ4 246 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 TMPRSS5Q9H3S3 457 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 CAPN10Q9HC96 672 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 NGRNQ9NPE2 291 aaKnown RBP6.58□□□□□ -1.36
GGPS1-208ENST00000497327 C9orf78Q9NZ63 289 aaPredicted RBP6.58□□□□□ -1.36
GGPS1-208ENST00000497327 WASF3Q9UPY6 502 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 NOP58Q9Y2X3 529 aaKnown RBP6.58□□□□□ -1.36
GGPS1-208ENST00000497327 NPFFR2Q9Y5X5 522 aa6.58□□□□□ -1.36
GGPS1-208ENST00000497327 C1QTNF3-AMACRE9PGA6 284 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 HGSO14964 777 aaPredicted RBP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 RPS6KA4O75676 772 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 RFX5P48382 616 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms