RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 MYH11P35749 1972 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 TRIP12Q14669 1992 aaPredicted RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 EVPLQ92817 2033 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 ADGRA3Q8IWK6 1321 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 ASAP2O43150 1006 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 VTNP04004 478 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 CCDC192P0DO97 292 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 NMT1P30419 496 aaKnown RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 CASP5P51878 434 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 ZNF445P59923 1031 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 STX1AQ16623 288 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 DPCR1Q3MIW9 517 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 ZNF720Q7Z2F6 126 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 KSR1Q8IVT5 923 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 DNAJB3Q8WWF6 145 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 ANO10Q9NW15 660 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 CCDC169A6NNP5 214 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 K7ENM7 598 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 B4GALT4O60513 344 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 SMTNP53814 917 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 SLC39A5Q6ZMH5 540 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 SLC17A8Q8NDX2 589 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 WNT8BQ93098 351 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
RGP1-202ENST00000496906 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 KMT5AQ9NQR1 393 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
RGP1-202ENST00000496906 LRRIQ4A6NIV6 560 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 SLC16A4O15374 487 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 GCNT3O95395 438 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 MYBP10242 640 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 GPC3P51654 580 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 PTK7Q13308 1070 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 SNX17Q15036 470 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 C1orf53Q5VUE5 145 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 LRSAM1Q6UWE0 723 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 EPM2AIP1Q7L775 607 aaPredicted RBP20.15■□□□□ 0.82
RGP1-202ENST00000496906 RPAINQ86UA6 219 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 FAM126BQ8IXS8 530 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 RNF149Q8NC42 400 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 TMEM161BQ8NDZ6 487 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 KCNN1Q92952 543 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 NLRP4Q96MN2 994 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 STRA6Q9BX79 667 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 TRPV6Q9H1D0 765 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 ST6GALNAC4Q9H4F1 302 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 C11orf49Q9H6J7 331 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 NOD1Q9Y239 953 aa20.15■□□□□ 0.82
RGP1-202ENST00000496906 PPP1R37O75864 691 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 CD44P16070 742 aaKnown RBP20.14■□□□□ 0.81
RGP1-202ENST00000496906 ATN1P54259 1190 aaPredicted RBP20.14■□□□□ 0.81
RGP1-202ENST00000496906 TFDP1Q14186 410 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 CDCA2Q69YH5 1023 aaPredicted RBP20.14■□□□□ 0.81
RGP1-202ENST00000496906 HAUS6Q7Z4H7 955 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 NME8Q8N427 588 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 MLKLQ8NB16 471 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 DEPTORQ8TB45 409 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 MROH7Q68CQ1 1323 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 DNAH12Q6ZR08 3092 aa20.14■□□□□ 0.81
RGP1-202ENST00000496906 PPP1R3GB7ZBB8 358 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 EIF3DO15371 548 aaKnown RBP eCLIP20.13■□□□□ 0.81
RGP1-202ENST00000496906 GPR32O75388 356 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 RPLP2P05387 115 aaKnown RBP20.13■□□□□ 0.81
RGP1-202ENST00000496906 SRGAP2CP0DJJ0 459 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 EN2P19622 333 aaPredicted RBP20.13■□□□□ 0.81
RGP1-202ENST00000496906 PRCPP42785 496 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 CDC42EP1Q00587 391 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 POU5F1BQ06416 359 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 TMEM62Q0P6H9 643 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 ALCAMQ13740 583 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 ZC2HC1CQ53FD0 456 aaPredicted RBP20.13■□□□□ 0.81
RGP1-202ENST00000496906 NECAB2Q7Z6G3 386 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 ZNF410Q86VK4 478 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 DHX38Q92620 1227 aaKnown RBP20.13■□□□□ 0.81
RGP1-202ENST00000496906 ZNF668Q96K58 619 aaPredicted RBP20.13■□□□□ 0.81
RGP1-202ENST00000496906 PPP1R16BQ96T49 567 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 NFKBIZQ9BYH8 718 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 ADAMTS10Q9H324 1103 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 IFT122Q9HBG6 1241 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 MAPK8IP1Q9UQF2 711 aa20.13■□□□□ 0.81
RGP1-202ENST00000496906 A0A087WZ62 844 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 H0YCG3 227 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 CD4P01730 458 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 NLRP11P59045 1033 aaKnown RBP20.12■□□□□ 0.81
RGP1-202ENST00000496906 PTENP60484 403 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 GTF2BQ00403 316 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 BMT2Q1RMZ1 405 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 TRIM71Q2Q1W2 868 aaKnown RBP20.12■□□□□ 0.81
RGP1-202ENST00000496906 C11orf57Q6ZUT1 292 aaPredicted RBP20.12■□□□□ 0.81
RGP1-202ENST00000496906 STXBP4Q6ZWJ1 553 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 ANKRD33Q7Z3H0 272 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 RSPH3Q86UC2 560 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 IFNLR1Q8IU57 520 aaPredicted RBP20.12■□□□□ 0.81
RGP1-202ENST00000496906 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 ADSSL1Q8N142 457 aa20.12■□□□□ 0.81
RGP1-202ENST00000496906 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms