RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 SRGAP2CP0DJJ0 459 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 GLRA2P23416 452 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 GRB10Q13322 594 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 ARL6IP4Q66PJ3 421 aaKnown RBP17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 FAM173BQ6P4H8 233 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 KCNK18Q7Z418 384 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 SNX29Q8TEQ0 813 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 GPRC5CQ9NQ84 441 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 RNF19AQ9NV58 838 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 KIAA1671Q9BY89 1806 aa17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 FNDC1Q4ZHG4 1894 aaPredicted RBP17.95■□□□□ 0.46
DNMT3A-215ENST00000496570 ASAP2O43150 1006 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 ATF7P17544 494 aaPredicted RBP17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 GRIN1Q05586 938 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 CAPSQ13938 189 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 RNF149Q8NC42 400 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 GDPD5Q8WTR4 605 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 CLP1Q92989 425 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 DDX19AQ9NUU7 478 aaKnown RBP17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 KIAA1024Q9UPX6 916 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 MTCH2Q9Y6C9 303 aa17.94■□□□□ 0.46
DNMT3A-215ENST00000496570 VWA3AA6NCI4 1184 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 E9PMD0 336 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 STX6O43752 255 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 STAG3L1P0CL83 205 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 SFPQP23246 707 aaKnown RBP eCLIP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 HOXA11P31270 313 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 PTENP60484 403 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 PTPAQ15257 358 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 HYIQ5T013 277 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 PADI6Q6TGC4 694 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 SRGAP1Q7Z6B7 1085 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 ZNF598Q86UK7 904 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 TMEM192Q8IY95 271 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 CMTR2Q8IYT2 770 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 FIBCD1Q8N539 461 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 PNMA5Q96PV4 448 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 TRAIPQ9BWF2 469 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 INO80BQ9C086 356 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 POLR3FQ9H1D9 316 aaPredicted RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 ELAC1Q9H777 363 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 CHST12Q9NRB3 414 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 TMEM161AQ9NX61 479 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 PCDHB7Q9Y5E2 793 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 CLIC4Q9Y696 253 aa17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-215ENST00000496570 A0A0U1RQF3 1178 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 FGFR1P11362 822 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 ZSCAN20P17040 1043 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 CYP11B2P19099 503 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 IGFBP4P22692 258 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 POU5F1BQ06416 359 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 BTG3Q14201 252 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 KRT79Q5XKE5 535 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 MAEAQ7L5Y9 396 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 BSNDQ8WZ55 320 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 BHMT2Q9H2M3 363 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 AGPAT5Q9NUQ2 364 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 STK24Q9Y6E0 443 aa17.92■□□□□ 0.46
DNMT3A-215ENST00000496570 PRRC2BQ5JSZ5 2229 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 SPTBN5Q9NRC6 3674 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 ARHGEF35A5YM69 484 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 C5orf67F2Z3F1 127 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 IBSPP21815 317 aaPredicted RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 MBTD1Q05BQ5 628 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 AMHR2Q16671 573 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 PAN2Q504Q3 1202 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 CATSPER4Q7RTX7 472 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 MCPH1Q8NEM0 835 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 LRRC15Q8TF66 581 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 SAMD11Q96NU1 681 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 NFKBIZQ9BYH8 718 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 POLD4Q9HCU8 107 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 HCSTQ9UBK5 93 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 LRFN2Q9ULH4 789 aa17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 PIN4Q9Y237 131 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-215ENST00000496570 ATG2AQ2TAZ0 1938 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 H3BNC9 293 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 EYA4O95677 639 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 BMP15O95972 392 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 BMPR1AP36894 532 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 PHKA2P46019 1235 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 TMEM119Q4V9L6 283 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 CLLU1OSQ5K130 101 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 UBXN11Q5T124 520 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 CASD1Q96PB1 797 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 MYH15Q9Y2K3 1946 aa17.9■□□□□ 0.46
DNMT3A-215ENST00000496570 XIRP2A4UGR9 3374 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 TBKBP1A7MCY6 615 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 MEIS3P2A8K0S8 358 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms