RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 CASD1Q96PB1 797 aa13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 EIF2AK1Q9BQI3 630 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CWH43Q9H720 699 aa13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 XPNPEP1Q9NQW7 623 aa13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CLDND1Q9NY35 253 aa13□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 B4GALT3O60512 393 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 NEMFO60524 1076 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TBX10O75333 385 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 SRGAP2CP0DJJ0 459 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 LTBRP36941 435 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 POLGP54098 1239 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 EMC2Q15006 297 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 EPHA7Q15375 998 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PTPROQ16827 1216 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ASAP3Q8TDY4 903 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TTC12Q9H892 705 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 COG5Q9UP83 839 aa12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-207ENST00000496318 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TBX3O15119 743 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 SLITRK3O94933 977 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 DHX33Q9H6R0 707 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 C1orf112Q9NSG2 853 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 COL4A3BPQ9Y5P4 624 aa12.98□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CITO14578 2027 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PER2O15055 1255 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 MED24O75448 989 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 RB1P06400 928 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 NRIP1P48552 1158 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ERVFC1P60507 584 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 FAM189BP81408 668 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 LAMTOR4Q0VGL1 99 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CATSPER4Q7RTX7 472 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 GPRC5CQ9NQ84 441 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
HLA-DQA1-207ENST00000496318 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 FGF18O76093 207 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 GLP2RO95838 553 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TECP42680 631 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 DNM2P50570 870 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 AAK1Q2M2I8 961 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 RNF149Q8NC42 400 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PABPC5Q96DU9 382 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 PLVAPQ9BX97 442 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 BARX2Q9UMQ3 279 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 USP20Q9Y2K6 914 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 RWDD3Q9Y3V2 267 aa12.96□□□□□ -0.33
HLA-DQA1-207ENST00000496318 ANK1P16157 1881 aa12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 WDFY4Q6ZS81 3184 aa12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
HLA-DQA1-207ENST00000496318 PHKA2P46019 1235 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms