RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ODF2LQ9ULJ1 636 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 COLQQ9Y215 455 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-235ENST00000495515 HPSEQ9Y251 543 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 DNAH12Q6ZR08 3092 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
HDAC6-235ENST00000495515 FGBP02675 491 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 ACRP10323 421 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 DARSP14868 501 aaKnown RBP18.93■□□□□ 0.62
HDAC6-235ENST00000495515 GLRA2P23416 452 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 BMP8BP34820 402 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 NAMPTP43490 491 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 PLEKHG4Q58EX7 1191 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 CLEC17AQ6ZS10 378 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 KSR1Q8IVT5 923 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 ASAP3Q8TDY4 903 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 CDHR5Q9HBB8 845 aa18.93■□□□□ 0.62
HDAC6-235ENST00000495515 LRRIQ4A6NIV6 560 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 EFCAB14O75071 495 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 FAM13AO94988 1023 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 SLFN14P0C7P3 912 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 NDUFA8P51970 172 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 RAD51AP2Q09MP3 1159 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 DMP1Q13316 513 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 CAPSQ13938 189 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 GPNMBQ14956 572 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 PCBP1Q15365 356 aaKnown RBP eCLIP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 ARSHQ5FYA8 562 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 ZBTB8OSQ8IWT0 167 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 DEPTORQ8TB45 409 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 ZNF668Q96K58 619 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 FTHL17Q9BXU8 183 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 NFKBIZQ9BYH8 718 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 C2orf40Q9H1Z8 148 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 KBTBD4Q9NVX7 518 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 LARSQ9P2J5 1176 aaKnown RBP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 NOC2LQ9Y3T9 749 aaKnown RBP18.92■□□□□ 0.62
HDAC6-235ENST00000495515 LOXHD1Q8IVV2 1947 aa18.92■□□□□ 0.62
HDAC6-235ENST00000495515 TRIOBPQ9H2D6 2365 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 CD52P31358 61 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 SMTNP53814 917 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 PTENP60484 403 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 NFX1Q12986 1120 aaKnown RBP18.91■□□□□ 0.62
HDAC6-235ENST00000495515 IKBKEQ14164 716 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 TMEM240Q5SV17 173 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 CHRDL2Q6WN34 429 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-235ENST00000495515 TMEM40Q8WWA1 233 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 DDX12PQ92771 950 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 REEP2Q9BRK0 252 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
HDAC6-235ENST00000495515 IFT122Q9HBG6 1241 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 PCDH10Q9P2E7 1040 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 PADI3Q9ULW8 664 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 PHLPP2Q6ZVD8 1323 aa18.91■□□□□ 0.62
HDAC6-235ENST00000495515 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 ABHD14A-ACY1A0A1B0GW23 586 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 CCDC169A6NNP5 214 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 PLS3P13797 630 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 EPHB4P54760 987 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 NCBP1Q09161 790 aaKnown RBP18.9■□□□□ 0.62
HDAC6-235ENST00000495515 GIT2Q14161 759 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 C16orf59Q7L2K0 433 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.9■□□□□ 0.621e-7■□□□□ 8.4
HDAC6-235ENST00000495515 ZHX3Q9H4I2 956 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 SERTAD1Q9UHV2 236 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 ST3GAL5Q9UNP4 418 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 TANC1Q9C0D5 1861 aa18.9■□□□□ 0.62
HDAC6-235ENST00000495515 NPHP3-ACAD11A0A0J9YXS1 232 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 MYMKA6NI61 221 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 H0YCG3 227 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 INO80B-WBP1J3KQ70 363 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 ZNF202O95125 648 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 SCP2P22307 547 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 EFNA5P52803 228 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 PEX3P56589 373 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 UBE2HP62256 183 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-235ENST00000495515 FAM160A1Q05DH4 1040 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 MAPK7Q13164 816 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 KANK3Q6NY19 840 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 OTOP2Q7RTS6 562 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 DYMQ7RTS9 669 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 CATSPER4Q7RTX7 472 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 DAW1Q8N136 415 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 MYCT1Q8N699 235 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 SLC17A8Q8NDX2 589 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 CNNM3Q8NE01 707 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 SPIRE2Q8WWL2 714 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 HERVK_113Q902F9 699 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 GOLPH3LQ9H4A5 285 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 POLD4Q9HCU8 107 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms