RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 FBXL19Q6PCT2 694 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CCDC174Q6PII3 467 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 ADGRF4Q8IZF3 695 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 PRPF38AQ8NAV1 312 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 GOLM1Q8NBJ4 401 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CTCFLQ8NI51 663 aaPredicted RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 SLF1Q9BQI6 1058 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 PAGR1Q9BTK6 254 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 TXNRD2Q9NNW7 524 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 BTBD7Q9P203 1132 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 DDX41Q9UJV9 622 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 LIMCH1Q9UPQ0 1083 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 SLC45A1Q9Y2W3 748 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 MYH6P13533 1939 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 VWA5AO00534 786 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 CA12O43570 354 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 TLR2O60603 784 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 PLA2G6O60733 806 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 CILPO75339 1184 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 CNMDO75829 334 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 KIF5BP33176 963 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 RACK1P63244 317 aaKnown RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 MAP2K1Q02750 393 aaPredicted RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 RAD51AP2Q09MP3 1159 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 SCRN1Q12765 414 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 PLS1Q14651 629 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 TTLL4Q14679 1199 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 TMEM132BQ14DG7 1078 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 PPM1JQ5JR12 505 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 BTNL9Q6UXG8 535 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 FAM160B2Q86V87 743 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 C12orf40Q86WS4 652 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 CPXCR1Q8N123 301 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 FBLIM1Q8WUP2 373 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 GATAD2BQ8WXI9 593 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 ELMO3Q96BJ8 720 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 PARK7Q99497 189 aaKnown RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 SLKQ9H2G2 1235 aaPredicted RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 RAVER2Q9HCJ3 691 aaKnown RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 ZCCHC17Q9NP64 241 aaKnown RBP8.65□□□□□ -1.02
RPGR-210ENST00000494841 ADAMTS5Q9UNA0 930 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 RAXQ9Y2V3 346 aa8.65□□□□□ -1.02
RPGR-210ENST00000494841 THSD7BQ9C0I4 1608 aa8.65□□□□□ -1.03
RPGR-210ENST00000494841 ADGRA2Q96PE1 1338 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 GFRA2O00451 464 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 GREM1O60565 184 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 PFKFB2O60825 505 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 ZBED4O75132 1171 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
RPGR-210ENST00000494841 ST3GAL1Q11201 340 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 NTRK3Q16288 839 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 C17orf99Q6UX52 265 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 LBX2Q6XYB7 198 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 BEND4Q6ZU67 534 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 TMTC3Q6ZXV5 915 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 HDXQ7Z353 690 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 HOMER1Q86YM7 354 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 RNF214Q8ND24 703 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 REPS2Q8NFH8 660 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 ZNF296Q8WUU4 475 aaPredicted RBP8.64□□□□□ -1.03
RPGR-210ENST00000494841 PHKBQ93100 1093 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 PIGSQ96S52 555 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 KCNF1Q9H3M0 494 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 SEMA6CQ9H3T2 930 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 RIOX1Q9H6W3 641 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 PIDD1Q9HB75 910 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 SLC38A10Q9HBR0 1119 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 RIPK3Q9Y572 518 aa8.64□□□□□ -1.03
RPGR-210ENST00000494841 CTDP1Q9Y5B0 961 aaPredicted RBP8.64□□□□□ -1.03
RPGR-210ENST00000494841 ZNF536O15090 1300 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 DYRK3O43781 588 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 PPP1R11O60927 126 aaPredicted RBP8.63□□□□□ -1.03
RPGR-210ENST00000494841 CTDNEP1O95476 244 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 FURINP09958 794 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 GCLCP48506 637 aaPredicted RBP8.63□□□□□ -1.03
RPGR-210ENST00000494841 GNAQP50148 359 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 CAP1Q01518 475 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 CDC37Q16543 378 aaPredicted RBP8.63□□□□□ -1.03
RPGR-210ENST00000494841 ZBTB37Q5TC79 503 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 CCDC83Q8IWF9 413 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 GPRC5AQ8NFJ5 357 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 GTF3C6Q969F1 213 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 ISL2Q96A47 359 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 TMX3Q96JJ7 454 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 ZSCAN31Q96LW9 406 aaPredicted RBP8.63□□□□□ -1.03
RPGR-210ENST00000494841 FAM83CQ9BQN1 747 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 SLC26A6Q9BXS9 759 aa8.63□□□□□ -1.03
RPGR-210ENST00000494841 RANBP17Q9H2T7 1088 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms