RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 FOXP3Q9BZS1 431 aa6.65□□□□□ -1.34
AC055758.1-201ENST00000494509 EPHX3Q9H6B9 360 aa6.65□□□□□ -1.34
AC055758.1-201ENST00000494509 CNTD2Q9H8S5 307 aa6.65□□□□□ -1.34
AC055758.1-201ENST00000494509 PDLIM7Q9NR12 457 aa6.65□□□□□ -1.34
AC055758.1-201ENST00000494509 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.35
AC055758.1-201ENST00000494509 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
AC055758.1-201ENST00000494509 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 FAM86C2PA6NEL3 165 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 KBTBD13C9JR72 458 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 RFXAPO00287 272 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 DNM1LO00429 736 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 NRDCO43847 1150 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 HTR3BO95264 441 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 RPL10P27635 214 aaKnown RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 VIPR1P32241 457 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 RGS3P49796 1198 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 MRE11P49959 708 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 GNAI1P63096 354 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 NFKB2Q00653 900 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 SPP2Q13103 211 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 CAMK2GQ13555 558 aaPredicted RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 GJC2Q5T442 439 aaPredicted RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 MFSD14CQ5VZR4 134 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 SLC39A5Q6ZMH5 540 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 CCDC129Q6ZRS4 1044 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 G2E3Q7L622 706 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 FBXO33Q7Z6M2 555 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 TMEFF1Q8IYR6 380 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 LINS1Q8NG48 757 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 FEZF2Q8TBJ5 459 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 DNAAF4Q8WXU2 420 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 LPAR1Q92633 364 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 RUNDC1Q96C34 613 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 APBA2Q99767 749 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 NOC4LQ9BVI4 516 aaKnown RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 PUS3Q9BZE2 481 aaKnown RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 USP40Q9NVE5 1235 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 MORF4L1Q9UBU8 362 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 DDX20Q9UHI6 824 aaKnown RBP6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
AC055758.1-201ENST00000494509 TRIM43BA6NCK2 446 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 MSCO60682 206 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 ZNF853P0CG23 659 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 MAPK4P31152 587 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 EPHB4P54760 987 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 LMNB2Q03252 620 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 TFF2Q03403 129 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 NMIQ13287 307 aaPredicted RBP6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 SNW1Q13573 536 aaKnown RBP6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 EPHA10Q5JZY3 1008 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 WDFY4Q6ZS81 3184 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 TSPYL6Q8N831 410 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 ARRDC4Q8NCT1 418 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 GPRC5AQ8NFJ5 357 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 FBXO27Q8NI29 283 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 TRIM43Q96BQ3 446 aaPredicted RBP6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 RHOVQ96L33 236 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 P2RX7Q99572 595 aaKnown RBP6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 PAGR1Q9BTK6 254 aa6.63□□□□□ -1.35
AC055758.1-201ENST00000494509 ZNF318Q5VUA4 2279 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 SIPA1L1O43166 1804 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 MROH5Q6ZUA9 1318 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 MYBBP1AQ9BQG0 1328 aaKnown RBP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 SLC22A31A6NKX4 558 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 BPNT1O95861 308 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 RAG1P15918 1043 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 ST13P50502 369 aaKnown RBP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 KCNQ1P51787 676 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 AFF3P51826 1226 aaKnown RBP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 CDR1P51861 262 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 CALD1Q05682 793 aaKnown RBP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 FPGSQ05932 587 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 PICALMQ13492 652 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 WDR43Q15061 677 aaKnown RBP eCLIP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 AAK1Q2M2I8 961 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 BBS9Q3SYG4 887 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 METTL24Q5JXM2 366 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 WDR78Q5VTH9 848 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 GPR142Q7Z601 462 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 CXorf38Q8TB03 319 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 WDR66Q8TBY9 1149 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 SYTL5Q8TDW5 730 aaPredicted RBP6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 USP6NLQ92738 828 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 FERMT2Q96AC1 680 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 TCTN2Q96GX1 697 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 PORCNQ9H237 461 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 TXNRD2Q9NNW7 524 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 PARP2Q9UGN5 583 aa6.62□□□□□ -1.35
AC055758.1-201ENST00000494509 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms