RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 OLFML2BQ68BL8 750 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 IQSEC1Q6DN90 963 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 WDR59Q6PJI9 974 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 HAUS6Q7Z4H7 955 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 CNGA4Q8IV77 575 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 EXOC8Q8IYI6 725 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 LINC01465Q8N7H1 131 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 SMC1BQ8NDV3 1235 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 PPTC7Q8NI37 304 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 ATP8B4Q8TF62 1192 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 BSNDQ8WZ55 320 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 FAM167AQ96KS9 214 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 NOC4LQ9BVI4 516 aaKnown RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 ABHD16BQ9H3Z7 469 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 POLD4Q9HCU8 107 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 PDGFCQ9NRA1 345 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 AGPAT3Q9NRZ7 376 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 NRBP2Q9NSY0 501 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 FBXL5Q9UKA1 691 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 TTC26A0AVF1 554 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 H0YCG3 227 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 CA12O43570 354 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 USO1O60763 962 aaKnown RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 PPFIA4O75335 1185 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 OFD1O75665 1012 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 NOL4O94818 638 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 TXNP10599 105 aaKnown RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 ADSSP30520 456 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 CASP14P31944 242 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 TCF7P36402 384 aaPredicted RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 SMTNP53814 917 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 ZBED6P86452 979 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 DUSP28Q4G0W2 176 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 TMEM63BQ5T3F8 832 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 FAM160B1Q5W0V3 765 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 PLA2G4FQ68DD2 849 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 SMYD5Q6GMV2 418 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 ZNF662Q6ZS27 426 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 TAS1R3Q7RTX0 852 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 FBXO16Q8IX29 292 aaPredicted RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 NELFCDQ8IXH7 590 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 CCAR2Q8N163 923 aaKnown RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 OR8K1Q8NGG5 319 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 SYN2Q92777 582 aaPredicted RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 SLC35C1Q96A29 364 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 ACCSQ96QU6 501 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 C16orf70Q9BSU1 422 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 SMARCAD1Q9H4L7 1026 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 MLXIPQ9HAP2 919 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 ATP6V0A4Q9HBG4 840 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 PLCB1Q9NQ66 1216 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 GPRC5CQ9NQ84 441 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 TBX20Q9UMR3 447 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 PLAGL2Q9UPG8 496 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
MSH5-217ENST00000494458 Q9Y3F1 56 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
MSH5-217ENST00000494458 A6NJR5 290 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 HBP1O60381 514 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 TOMM70O94826 608 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 GH1P01241 217 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 TUBB4AP04350 444 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 TPM2P07951 284 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ZNF865P0CJ78 1059 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 XRCC5P13010 732 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 GARTP22102 1010 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 GLRA2P23416 452 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 CNGA1P29973 690 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 PSMC2P35998 433 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 NAMPTP43490 491 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 MTIF2P46199 727 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 CASP4P49662 377 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 ADKP55263 362 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 PEX3P56589 373 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 CLDN10P78369 228 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 SREBF2Q12772 1141 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 KCNH2Q12809 1159 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 MKRN3Q13064 507 aaKnown RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 DMP1Q13316 513 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 ACVR2BQ13705 512 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 EMC2Q15006 297 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 PLCB4Q15147 1175 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 SYCP1Q15431 976 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 C1orf220Q5T0J3 134 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 IER5Q5VY09 327 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 CDCA2Q69YH5 1023 aaPredicted RBP7.45□□□□□ -1.22
MSH5-217ENST00000494458 SLC39A4Q6P5W5 647 aa7.45□□□□□ -1.22
MSH5-217ENST00000494458 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms