RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 LINC00476Q8WZB0 136 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 C1QTNF7Q9BXJ2 289 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 SLC29A3Q9BZD2 475 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 MAGEL2Q9UJ55 1249 aa3.21□□□□□ -1.9
PTPN12-212ENST00000494248 RBM8AQ9Y5S9 174 aaKnown RBP3.21□□□□□ -1.9
PTPN12-212ENST00000494248 CGB1A6NKQ9 187 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 ZNF561-AS1K7EIQ3 104 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 STC2O76061 302 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 MMEP08473 750 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 ZNF81P51508 661 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 USP14P54578 494 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 BPIFB4P59827 614 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 PAK1Q13153 545 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 TM4SF20Q53R12 229 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 MAMDC2Q7Z304 686 aaPredicted RBP3.2□□□□□ -1.9
PTPN12-212ENST00000494248 PTRH1Q86Y79 214 aaKnown RBP3.2□□□□□ -1.9
PTPN12-212ENST00000494248 CMTR2Q8IYT2 770 aaKnown RBP3.2□□□□□ -1.9
PTPN12-212ENST00000494248 SUPT20HQ8NEM7 779 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 MRRFQ96E11 262 aaKnown RBP3.2□□□□□ -1.9
PTPN12-212ENST00000494248 MYEOVQ96EZ4 313 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 ZNF512Q96ME7 567 aaPredicted RBP3.2□□□□□ -1.9
PTPN12-212ENST00000494248 TCF25Q9BQ70 676 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 POLR3GLQ9BT43 218 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 SPATA5L1Q9BVQ7 753 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 IL23AQ9NPF7 189 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 USP35Q9P2H5 1018 aa3.2□□□□□ -1.9
PTPN12-212ENST00000494248 TRAV20A0A0B4J274 112 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 PRAMEF25A6NGN4 478 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 TMEM200CA6NKL6 621 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 ARVCFO00192 962 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 AQP7O14520 342 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 KCNK3O14649 394 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 C1QL1O75973 258 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 SCAF4O95104 1147 aaKnown RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 C1RP00736 705 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 FGRP09769 529 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 LAG3P18627 525 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 HK1P19367 917 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 IFRD2Q12894 506 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 DDR2Q16832 855 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 OSTM1Q86WC4 334 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 DHX37Q8IY37 1157 aaKnown RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 FAM177A1Q8N128 213 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 ST13P5Q8NFI4 369 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 FBXW5Q969U6 566 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 ZNF669Q96BR6 464 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 SLC7A6OSQ96CW6 309 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-212ENST00000494248 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.19□□□□□ -1.92e-7■■■□□ 18.7
PTPN12-212ENST00000494248 ZNF408Q9H9D4 720 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 DKK2Q9UBU2 259 aa3.19□□□□□ -1.9
PTPN12-212ENST00000494248 GSTA4O15217 222 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 PPFIA4O75335 1185 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 IGLV2-14P01704 120 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 APPP05067 770 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 HOXB6P17509 224 aaKnown RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 CANXP27824 592 aaKnown RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 ELLP55199 621 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 JAM2P57087 298 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 SESN2P58004 480 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 ANTXR2P58335 489 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 TCIRG1Q13488 830 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 YOD1Q5VVQ6 348 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 FSTL4Q6MZW2 842 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 KLHDC10Q6PID8 442 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 C16orf59Q7L2K0 433 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 ARHGEF19Q8IW93 802 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 LRRC47Q8N1G4 583 aaKnown RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 LILRA3Q8N6C8 439 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 CELF2-AS1Q8N7Q2 184 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 PCDH19Q8TAB3 1148 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 IPO9Q96P70 1041 aaKnown RBP3.18□□□□□ -1.9
PTPN12-212ENST00000494248 SMURF1Q9HCE7 757 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 ST7Q9NRC1 585 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 CBLCQ9ULV8 474 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 ASB1Q9Y576 335 aa3.18□□□□□ -1.9
PTPN12-212ENST00000494248 RASSF10A6NK89 507 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 KCNAB3O43448 404 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 MFAP3LO75121 409 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 PYGMP11217 842 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 NAT1P18440 290 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 APEX1P27695 318 aaKnown RBP3.17□□□□□ -1.9
PTPN12-212ENST00000494248 CXCR5P32302 372 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 LACTBP83111 547 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-212ENST00000494248 NHLH1Q02575 133 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 MAP3K12Q12852 859 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 GAGE13Q4V321 117 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 TAF7LQ5H9L4 462 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 MTDHQ86UE4 582 aaKnown RBP3.17□□□□□ -1.9
PTPN12-212ENST00000494248 NOSTRINQ8IVI9 506 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 SH2D3CQ8N5H7 860 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 ASB15Q8WXK1 588 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 NELL1Q92832 810 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 PTPRN2Q92932 1015 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 CATSPERZQ9NTU4 200 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 TRAF6Q9Y4K3 522 aa3.17□□□□□ -1.9
PTPN12-212ENST00000494248 PRAMEF22A3QJZ6 481 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 LRRC3CA6NJW4 275 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 KRT15P19012 456 aa3.16□□□□□ -1.9
PTPN12-212ENST00000494248 ERCC5P28715 1186 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms