RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
SSB-212ENST00000494051 NKD2Q969F2 451 aaPredicted RBP7.58□□□□□ -1.2
SSB-212ENST00000494051 HIST1H2AHQ96KK5 128 aa7.58□□□□□ -1.2
SSB-212ENST00000494051 HIST1H2AJQ99878 128 aa7.58□□□□□ -1.2
SSB-212ENST00000494051 CTDP1Q9Y5B0 961 aaPredicted RBP7.58□□□□□ -1.2
SSB-212ENST00000494051 PPP2R3BQ9Y5P8 575 aa7.58□□□□□ -1.2
SSB-212ENST00000494051 MATN2O00339 956 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 PRRG2O14669 202 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 HNRNPLP14866 589 aaKnown RBP eCLIP7.57□□□□□ -1.2
SSB-212ENST00000494051 ATP2C1P98194 919 aaPredicted RBP7.57□□□□□ -1.2
SSB-212ENST00000494051 ACAP1Q15027 740 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 CCDC62Q6P9F0 684 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 CHST13Q8NET6 341 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 CFHR4Q92496 578 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 HAPLN2Q9GZV7 340 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 CNOT11Q9UKZ1 510 aaKnown RBP7.57□□□□□ -1.2
SSB-212ENST00000494051 PCDHB6Q9Y5E3 794 aa7.57□□□□□ -1.2
SSB-212ENST00000494051 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 DAPK3O43293 454 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 PFKMP08237 780 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 MANFP55145 182 aaKnown RBP7.56□□□□□ -1.2
SSB-212ENST00000494051 HGFACQ04756 655 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 PDCD1Q15116 288 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 TCTN3Q6NUS6 607 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 PRRT2Q7Z6L0 340 aaPredicted RBP7.56□□□□□ -1.2
SSB-212ENST00000494051 CDYL2Q8N8U2 506 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 LPPQ93052 612 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 SAMD11Q96NU1 681 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 VTA1Q9NP79 307 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 SMPD4Q9NXE4 827 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 ST6GALNAC2Q9UJ37 374 aa7.56□□□□□ -1.2
SSB-212ENST00000494051 A0A0A6YYK5 440 aaPredicted RBP7.55□□□□□ -1.2
SSB-212ENST00000494051 GOLGA8BA8MQT2 603 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 POU3F3P20264 500 aaPredicted RBP7.55□□□□□ -1.2
SSB-212ENST00000494051 ICAM4Q14773 271 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 CT83Q5H943 113 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 GAB3Q8WWW8 586 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 SLC7A6OSQ96CW6 309 aaPredicted RBP7.55□□□□□ -1.2
SSB-212ENST00000494051 RPL10LQ96L21 214 aaKnown RBP7.55□□□□□ -1.2
SSB-212ENST00000494051 OR14A2Q96R54 314 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 SOX7Q9BT81 388 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 ZFR2Q9UPR6 939 aaKnown RBP7.55□□□□□ -1.2
SSB-212ENST00000494051 NUMBLQ9Y6R0 609 aa7.55□□□□□ -1.2
SSB-212ENST00000494051 NCANO14594 1321 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 GPR39O43194 453 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 SLC26A4O43511 780 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 FOXS1O43638 330 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 ADCY7P51828 1080 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 BPIFB4P59827 614 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 PPARAQ07869 468 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 MAN2A1Q16706 1144 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 CLEC14AQ86T13 490 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 ANKRD53Q8N9V6 530 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 PLA2G15Q8NCC3 412 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 COG1Q8WTW3 980 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 PLA2G12BQ9BX93 195 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 WNT8AQ9H1J5 351 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 MCM8Q9UJA3 840 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
SSB-212ENST00000494051 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 PATE3B3GLJ2 98 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 FSBPO95073 299 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 LPLP06858 475 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 XPAP23025 273 aaPredicted RBP7.53□□□□□ -1.2
SSB-212ENST00000494051 BUD31P41223 144 aaPredicted RBP7.53□□□□□ -1.2
SSB-212ENST00000494051 SCAND1P57086 179 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 SPATS1Q496A3 300 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 PITRM1Q5JRX3 1037 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
SSB-212ENST00000494051 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
SSB-212ENST00000494051 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
SSB-212ENST00000494051 CMIPQ8IY22 773 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 EAF2Q96CJ1 260 aaPredicted RBP7.53□□□□□ -1.2
SSB-212ENST00000494051 UIMC1Q96RL1 719 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 KRTAP9-3Q9BYQ3 159 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 OSBPL6Q9BZF3 934 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
SSB-212ENST00000494051 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.53□□□□□ -1.2
SSB-212ENST00000494051 ZNF623O75123 536 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 RPS19P39019 145 aaKnown RBP7.52□□□□□ -1.21
SSB-212ENST00000494051 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
SSB-212ENST00000494051 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
SSB-212ENST00000494051 UGT8Q16880 541 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 KRT40Q6A162 431 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 ZNF585AQ6P3V2 769 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 LYSMD2Q8IV50 215 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 GPR135Q8IZ08 494 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 FUKQ8N0W3 1084 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 DNERQ8NFT8 737 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 AHCYL2Q96HN2 611 aaKnown RBP7.52□□□□□ -1.21
SSB-212ENST00000494051 ACAP3Q96P50 834 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 PRDM12Q9H4Q4 367 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 PRSS50Q9UI38 385 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 EDARQ9UNE0 448 aa7.52□□□□□ -1.21
SSB-212ENST00000494051 ATP8A1Q9Y2Q0 1164 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms