RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 OSBP2Q969R2 916 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 FAM107BQ9H098 131 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 ATRXP46100 2492 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 HAS3O00219 553 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 ZBTB43O43298 467 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 ARIH2O95376 493 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 PDGFBP01127 241 aaPredicted RBP11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 ICAM1P05362 532 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 IFNAR1P17181 557 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 NDUFV1P49821 464 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 ANTXR2P58335 489 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 CAMK1Q14012 370 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 CCDC62Q6P9F0 684 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 LEKR1Q6ZMV7 388 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 NOSTRINQ8IVI9 506 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 FIBCD1Q8N539 461 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 RMDN1Q96DB5 314 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 FUT8Q9BYC5 575 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 KRT23Q9C075 422 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 INCENPQ9NQS7 918 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 TMEM51Q9NW97 253 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
PDLIM1-205ENST00000493949 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SPTBN2O15020 2390 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 GPAA1O43292 621 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 GNAT2P19087 354 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SLC1A4P43007 532 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 HNRNPH2P55795 449 aaKnown RBP11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 PDE4DQ08499 809 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SSRP1Q08945 709 aaKnown RBP11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 NR1I3Q14994 352 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SART3Q15020 963 aaKnown RBP11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 MAP9Q49MG5 647 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SPATA1Q5VX52 437 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 ZNF662Q6ZS27 426 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 DGLUCYQ7Z3D6 616 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 PPFIBP1Q86W92 1011 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 TMTC1Q8IUR5 882 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 TMEM105Q8N8V8 129 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 DNERQ8NFT8 737 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 FAM71BQ8TC56 605 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 SUSD6Q92537 303 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 PPP2R3CQ969Q6 453 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 RC3H2Q9HBD1 1191 aaKnown RBP11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 FANCLQ9NW38 375 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 USP15Q9Y4E8 981 aaPredicted RBP11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 PLXNA4Q9HCM2 1894 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 FANCMQ8IYD8 2048 aa11.74□□□□□ -0.53
PDLIM1-205ENST00000493949 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 BIN1O00499 593 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 NFIBO00712 420 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 FOXP2O15409 715 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 NMT2O60551 498 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 CLSTN1O94985 981 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 UPP2O95045 317 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 GLP2RO95838 553 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 F2P00734 622 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 GH1P01241 217 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 XBP1P17861 261 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 ACTN2P35609 894 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 PSEN2P49810 448 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 PDE4BQ07343 736 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 IKQ13123 557 aaPredicted RBP11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 ZSCAN26Q16670 478 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 DGKDQ16760 1214 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 LONRF2Q1L5Z9 754 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 WDR93Q6P2C0 686 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 ZNF444Q8N0Y2 327 aaPredicted RBP11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 SEPT8Q92599 483 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 P2RX5Q93086 422 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 IQCDQ96DY2 449 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms