RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ZNF174Q15697 407 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 VRK3Q8IV63 474 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 PROKR1Q8TCW9 393 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 RPGRQ92834 1020 aaKnown RBP6.42□□□□□ -1.38
SMC4-223ENST00000493695 MAML3Q96JK9 1138 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 ZNF512Q96ME7 567 aaPredicted RBP6.42□□□□□ -1.38
SMC4-223ENST00000493695 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
SMC4-223ENST00000493695 KCMF1Q9P0J7 381 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 SORCS3Q9UPU3 1222 aa6.42□□□□□ -1.38
SMC4-223ENST00000493695 MAFO75444 373 aaPredicted RBP6.41□□□□□ -1.38
SMC4-223ENST00000493695 JUNP05412 331 aaKnown RBP6.41□□□□□ -1.38
SMC4-223ENST00000493695 VSIG10L2P0DP72 767 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 ZBTB48P10074 688 aaPredicted RBP6.41□□□□□ -1.38
SMC4-223ENST00000493695 HNRNPLP14866 589 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMC4-223ENST00000493695 HK1P19367 917 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 LMO1P25800 156 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
SMC4-223ENST00000493695 FNTBP49356 437 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 ARHGAP44Q17R89 818 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 GAGE13Q4V321 117 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 MBNL2Q5VZF2 373 aaKnown RBP6.41□□□□□ -1.38
SMC4-223ENST00000493695 KCNV1Q6PIU1 500 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 MRGPREQ86SM8 312 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 ZSWIM2Q8NEG5 633 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 GPR150Q8NGU9 434 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 RIOX1Q9H6W3 641 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 ZNHIT2Q9UHR6 403 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 PCSK5Q92824 1860 aa6.41□□□□□ -1.38
SMC4-223ENST00000493695 H7C1D1 291 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 RHOBTB3O94955 611 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 ABHD16AO95870 558 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 TRIM61Q5EBN2 209 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 LY6G5CQ5SRR4 150 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 PCSK4Q6UW60 755 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 Q6ZPA2 131 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 CABP5Q9NP86 173 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 ACSS2Q9NR19 701 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 SNTG2Q9NY99 539 aa6.4□□□□□ -1.38
SMC4-223ENST00000493695 KLRG2A4D1S0 409 aaPredicted RBP6.39□□□□□ -1.39
SMC4-223ENST00000493695 KCNA6P17658 529 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 RABGGTBP53611 331 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 RASA3Q14644 834 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 CLEC14AQ86T13 490 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 NKD2Q969F2 451 aaPredicted RBP6.39□□□□□ -1.39
SMC4-223ENST00000493695 UIMC1Q96RL1 719 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
SMC4-223ENST00000493695 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
SMC4-223ENST00000493695 C14orf93Q9H972 538 aaKnown RBP6.39□□□□□ -1.39
SMC4-223ENST00000493695 PTPDC1A2A3K4 754 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 RECQL4O94761 1208 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 SCAF4O95104 1147 aaKnown RBP6.38□□□□□ -1.39
SMC4-223ENST00000493695 BCAR1P56945 870 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 ADAM8P78325 824 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 TIGD2Q4W5G0 525 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 CMTM4Q8IZR5 234 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 KIAA1958Q8N8K9 716 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 ST8SIA2Q92186 375 aa6.38□□□□□ -1.39
SMC4-223ENST00000493695 EIF2B4Q9UI10 523 aaKnown RBP6.38□□□□□ -1.39
SMC4-223ENST00000493695 TNPO3Q9Y5L0 923 aaKnown RBP6.38□□□□□ -1.39
SMC4-223ENST00000493695 CCDC163A0A0D9SF12 145 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 B4E1Z4 1266 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 MAFGO15525 162 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 OPA1O60313 960 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 GLRX3O76003 335 aaKnown RBP6.37□□□□□ -1.39
SMC4-223ENST00000493695 CYP17A1P05093 508 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 PTX3P26022 381 aaPredicted RBP6.37□□□□□ -1.39
SMC4-223ENST00000493695 KIR2DL3P43628 341 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 TIGD7Q6NT04 549 aaPredicted RBP6.37□□□□□ -1.39
SMC4-223ENST00000493695 OTOP1Q7RTM1 612 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 BMP8AQ7Z5Y6 402 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 C7orf31Q8N865 590 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 CHST14Q8NCH0 376 aa6.37□□□□□ -1.39
SMC4-223ENST00000493695 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
SMC4-223ENST00000493695 DVL2O14641 736 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 STC2O76061 302 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 RAPGEF3O95398 923 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 IGFALSP35858 605 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 MRPS21P82921 87 aaKnown RBP6.36□□□□□ -1.39
SMC4-223ENST00000493695 ADCY2Q08462 1091 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 SPIDRQ14159 915 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 FAM214AQ32MH5 1076 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
SMC4-223ENST00000493695 NME9Q86XW9 330 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 MDGA1Q8NFP4 955 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 PMFBP1Q8TBY8 1022 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
SMC4-223ENST00000493695 CYP4F11Q9HBI6 524 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 PTGFRNQ9P2B2 879 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 TRPS1Q9UHF7 1281 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 PACSIN3Q9UKS6 424 aa6.36□□□□□ -1.39
SMC4-223ENST00000493695 ITGB1P05556 798 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 SLC9A1P19634 815 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 COL10A1Q03692 680 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 OR5M3Q8NGP4 307 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 MTG2Q9H4K7 406 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms