RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
HPS4-216ENST00000493455 HERC4Q5GLZ8 1057 aaPredicted RBP17.42■□□□□ 0.38
HPS4-216ENST00000493455 ODR4Q5SWX8 454 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 DAW1Q8N136 415 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 DEPTORQ8TB45 409 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 FDXACB1Q9BRP7 624 aaPredicted RBP17.42■□□□□ 0.38
HPS4-216ENST00000493455 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
HPS4-216ENST00000493455 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 PARVGQ9HBI0 331 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 TRPV2Q9Y5S1 764 aa17.42■□□□□ 0.38
HPS4-216ENST00000493455 K7ENM7 598 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 SLC16A4O15374 487 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 CSDE1O75534 798 aaKnown RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 RPN1P04843 607 aaKnown RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 SYN1P17600 705 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 GPC3P51654 580 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 DPYDQ12882 1025 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 COASYQ13057 564 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 MXD4Q14582 209 aaPredicted RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 PPP2R5AQ15172 486 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 CAVIN1Q6NZI2 390 aaKnown RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 NME8Q8N427 588 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 CAGE1Q8TC20 777 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 HPS3Q969F9 1004 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 CCDC47Q96A33 483 aaKnown RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 SCLYQ96I15 445 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 CDHR5Q9HBB8 845 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 EXOC1Q9NV70 894 aa17.41■□□□□ 0.38
HPS4-216ENST00000493455 ZMYND8Q9ULU4 1186 aaPredicted RBP17.41■□□□□ 0.38
HPS4-216ENST00000493455 TRIM43BA6NCK2 446 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 PLS3P13797 630 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 RAG1P15918 1043 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 KMT5BQ4FZB7 885 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 ISM2Q6H9L7 571 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 UNC13DQ70J99 1090 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 LRRC8DQ7L1W4 858 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 SMARCE1Q969G3 411 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 TRIM43Q96BQ3 446 aaPredicted RBP17.4■□□□□ 0.38
HPS4-216ENST00000493455 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
HPS4-216ENST00000493455 TBX21Q9UL17 535 aa17.4■□□□□ 0.38
HPS4-216ENST00000493455 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 BIN1O00499 593 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 ASAP2O43150 1006 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 TRAK2O60296 914 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 GPR32O75388 356 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 SMC2O95347 1197 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 CHRNA1P02708 482 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 GHRP10912 638 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 SELPP16109 830 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 GAP43P17677 238 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 FGFR4P22455 802 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
HPS4-216ENST00000493455 NAMPTP43490 491 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 PHKA2P46019 1235 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 NPTX2P47972 431 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 SMTNP53814 917 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 MDM2Q00987 491 aaPredicted RBP17.39■□□□□ 0.37
HPS4-216ENST00000493455 ZBTB8OSQ8IWT0 167 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 GCOM2Q9BZD3 368 aaPredicted RBP17.39■□□□□ 0.37
HPS4-216ENST00000493455 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
HPS4-216ENST00000493455 MRPL44Q9H9J2 332 aaKnown RBP17.39■□□□□ 0.37
HPS4-216ENST00000493455 PCDHA5Q9Y5H7 936 aa17.39■□□□□ 0.37
HPS4-216ENST00000493455 KLRC4O43908 158 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 GCNT3O95395 438 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 RPLP2P05387 115 aaKnown RBP17.38■□□□□ 0.37
HPS4-216ENST00000493455 MYL1P05976 194 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 MGAT3Q09327 533 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 TMEM132AQ24JP5 1023 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 DEFB128Q7Z7B8 93 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 WNT8AQ9H1J5 351 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 SLC39A2Q9NP94 309 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
HPS4-216ENST00000493455 PVALEFA0A1B0GWK0 134 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 CAND2O75155 1236 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 ZNF131P52739 623 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 CRYBB1P53674 252 aaPredicted RBP17.37■□□□□ 0.37
HPS4-216ENST00000493455 FAM26FQ5R3K3 315 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 CCDC183Q5T5S1 534 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 TMEM40Q8WWA1 233 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
HPS4-216ENST00000493455 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 OSBPL7Q9BZF2 842 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 TMEM63CQ9P1W3 806 aa17.37■□□□□ 0.37
HPS4-216ENST00000493455 FRMD3A2A2Y4 597 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 KIAA0355O15063 1070 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 TIMP1P01033 207 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 IQCF3P0C7M6 154 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 MYBP10242 640 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 IBSPP21815 317 aaPredicted RBP17.36■□□□□ 0.37
HPS4-216ENST00000493455 ITGB8P26012 769 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 PTENP60484 403 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 CDC42EP1Q00587 391 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms