RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SAFB2Q14151 953 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTCD3-218ENST00000493430 RRP1BQ14684 758 aaKnown RBP4.81□□□□□ -1.64
PTCD3-218ENST00000493430 SMN1Q16637 294 aaKnown RBP4.81□□□□□ -1.64
PTCD3-218ENST00000493430 FNDC7Q5VTL7 733 aa4.81□□□□□ -1.64
PTCD3-218ENST00000493430 DDX53Q86TM3 631 aaKnown RBP4.81□□□□□ -1.64
PTCD3-218ENST00000493430 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
PTCD3-218ENST00000493430 HECAQ9UBI9 543 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-218ENST00000493430 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
PTCD3-218ENST00000493430 SIGLEC1Q9BZZ2 1709 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 KDM6BO15054 1643 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 KIF21BO75037 1637 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 MAP3K4Q9Y6R4 1608 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 A0A087X1B8 175 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 GOLGA8BA8MQT2 603 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 B4E1Z4 1266 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 KRT37O76014 449 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 PEX11BO96011 259 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 STAT3P40763 770 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 KIF11P52732 1056 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 INHBEP58166 350 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 DGKDQ16760 1214 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
PTCD3-218ENST00000493430 MIEF2Q96C03 454 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 NCOA5Q9HCD5 579 aaKnown RBP4.8□□□□□ -1.64
PTCD3-218ENST00000493430 ACSS2Q9NR19 701 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 MAGEL2Q9UJ55 1249 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 REXO2Q9Y3B8 237 aaKnown RBP4.8□□□□□ -1.64
PTCD3-218ENST00000493430 RBM8AQ9Y5S9 174 aaKnown RBP4.8□□□□□ -1.64
PTCD3-218ENST00000493430 DISP1Q96F81 1524 aa4.8□□□□□ -1.64
PTCD3-218ENST00000493430 C2orf78A6NCI8 922 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 PLD2O14939 933 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 PRLP01236 227 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 RGS3P49796 1198 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 MECP2P51608 486 aaKnown RBP4.79□□□□□ -1.64
PTCD3-218ENST00000493430 ANTXR2P58335 489 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 BPIFB4P59827 614 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 ACAP1Q15027 740 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 C2orf27AQ580R0 203 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 SLFN12LQ6IEE8 588 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 ZNF662Q6ZS27 426 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 ANKRD53Q8N9V6 530 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 LARP4BQ92615 738 aaKnown RBP4.79□□□□□ -1.64
PTCD3-218ENST00000493430 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 RPL10LQ96L21 214 aaKnown RBP4.79□□□□□ -1.64
PTCD3-218ENST00000493430 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 SAMD15Q9P1V8 674 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 PTCH2Q9Y6C5 1203 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 KIF27Q86VH2 1401 aa4.79□□□□□ -1.64
PTCD3-218ENST00000493430 UBA6A0AVT1 1052 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-218ENST00000493430 M0R2C6 588 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 CYP17A1P05093 508 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 IGFALSP35858 605 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 CNGB1Q14028 1251 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-218ENST00000493430 GAGE13Q4V321 117 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 TTC38Q5R3I4 469 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
PTCD3-218ENST00000493430 FAM111BQ6SJ93 734 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 GAREM2Q75VX8 874 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 CHST14Q8NCH0 376 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 OR5AN1Q8NGI8 311 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 GPHA2Q96T91 129 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 PCIF1Q9H4Z3 704 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 SLC2A4RGQ9NR83 387 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 SAMD9Q5K651 1589 aa4.78□□□□□ -1.64
PTCD3-218ENST00000493430 RAPGEF2Q9Y4G8 1499 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 UBE2QL1A1L167 161 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 DVL2O14641 736 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 GLRX3O76003 335 aaKnown RBP4.77□□□□□ -1.65
PTCD3-218ENST00000493430 RAPGEF3O95398 923 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 SCNN1GP51170 649 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 ZNF174Q15697 407 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 MRGPRGQ86SM5 289 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 NME9Q86XW9 330 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 PLA2G15Q8NCC3 412 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 PMFBP1Q8TBY8 1022 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 NKD2Q969F2 451 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-218ENST00000493430 DYDC2Q96IM9 177 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 WDR92Q96MX6 357 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 TUBGCP5Q96RT8 1024 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 PRRX2Q99811 253 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 TCF25Q9BQ70 676 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 CABP5Q9NP86 173 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 KIAA0586Q9BVV6 1533 aa4.77□□□□□ -1.65
PTCD3-218ENST00000493430 PLB1Q6P1J6 1458 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 RAPGEF6Q8TEU7 1601 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 H7C1D1 291 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 DAPK3O43293 454 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 ABCA8O94911 1581 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 ASLP04424 464 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 RANGAP1P46060 587 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-218ENST00000493430 BCAR1P56945 870 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 ELAVL1Q15717 326 aaKnown RBP4.76□□□□□ -1.65
PTCD3-218ENST00000493430 FNDC3BQ53EP0 1204 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms