RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 MIS18BP1Q6P0N0 1132 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-214ENST00000492858 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 KLHL5Q96PQ7 755 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 VN1R3Q9BXE9 311 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
GPNMB-214ENST00000492858 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 E7EWF7 191 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 MEIS1O00470 390 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 GALTP07902 379 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CNPP09543 421 aaKnown RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 DARSP14868 501 aaKnown RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 GLULP15104 373 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 TMOD1P28289 359 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 LONRF3Q496Y0 759 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 MAML2Q8IZL2 1156 aaPredicted RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 LRRC71Q8N4P6 559 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CCDC82Q8N4S0 544 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CMASQ8NFW8 434 aaPredicted RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 PJA1Q8NG27 643 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 STAMQ92783 540 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 NXPE3Q969Y0 559 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 MYADMQ96S97 322 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 WDR6Q9NNW5 1121 aaKnown RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 MAN1C1Q9NR34 630 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 DACT1Q9NYF0 836 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 EPS15L1Q9UBC2 864 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
GPNMB-214ENST00000492858 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
GPNMB-214ENST00000492858 CLUHO75153 1309 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 EVPLQ92817 2033 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 MAGEB2O15479 319 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 LRRN2O75325 713 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
GPNMB-214ENST00000492858 RXRAP19793 462 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 ZNF76P36508 570 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 SLC11A1P49279 550 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
GPNMB-214ENST00000492858 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 LPPQ93052 612 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
GPNMB-214ENST00000492858 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-214ENST00000492858 SPTLC1O15269 473 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
GPNMB-214ENST00000492858 MYBP10242 640 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 PHKA2P46019 1235 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 GPC3P51654 580 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 MB21D2Q8IYB1 491 aaPredicted RBP13.65□□□□□ -0.22
GPNMB-214ENST00000492858 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 GPR161Q8N6U8 529 aaKnown RBP13.65□□□□□ -0.22
GPNMB-214ENST00000492858 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 USP24Q9UPU5 2620 aa13.65□□□□□ -0.22
GPNMB-214ENST00000492858 C2orf16Q68DN1 1984 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 IPO5O00410 1097 aaKnown RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 C2CD2LO14523 706 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 INPPL1O15357 1258 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 LAMTOR5O43504 91 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 B4GALT3O60512 393 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 LILRB3O75022 631 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 RFPL2O75678 378 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 FOSP01100 380 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 SREBF1P36956 1147 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 LMNB2Q03252 620 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 PTH1RQ03431 593 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 NIPA1Q7RTP0 329 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 PLA2G4DQ86XP0 818 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 ST13P5Q8NFI4 369 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 SECISBP2LQ93073 1101 aaKnown RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms