RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 GPR88Q9GZN0 384 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 PPP1R1BQ9UD71 204 aaPredicted RBP13.99□□□□□ -0.17
PRAME-213ENST00000492657 TSKSQ9UJT2 592 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 FER1L6Q2WGJ9 1857 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 F8VZ95 297 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 BCRP11274 1271 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 VCAM1P19320 739 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 MUTP22033 750 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 NPEPPSP55786 919 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 RPS6KA1Q15418 735 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 NFIL3Q16649 462 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 NBPF12Q5TAG4 269 aaPredicted RBP13.99□□□□□ -0.17
PRAME-213ENST00000492657 NSMFQ6X4W1 530 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 LRRC57Q8N9N7 239 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 MKNK1Q9BUB5 465 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 VIPAS39Q9H9C1 493 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 FBXL5Q9UKA1 691 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 RGPD3A6NKT7 1758 aaPredicted RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 RGPD4Q7Z3J3 1758 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 H2AFZP0C0S5 128 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 SOX5P35711 763 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRAME-213ENST00000492657 GALCP54803 685 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 DNAJC21Q5F1R6 531 aaKnown RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 PLA2G4FQ68DD2 849 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 PHLDB3Q6NSJ2 640 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 H2AFVQ71UI9 128 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 TSEN2Q8NCE0 465 aaKnown RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 TPCN2Q8NHX9 752 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 JDP2Q8WYK2 163 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 KCND2Q9NZV8 630 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 PIM2Q9P1W9 311 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 BACH1O14867 736 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 KIF4AO95239 1232 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 QARSP47897 775 aaKnown RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 CARSP49589 748 aaKnown RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 MYL7Q01449 175 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 PCNX4Q63HM2 1172 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 PALB2Q86YC2 1186 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 MCF2L2Q86YR7 1114 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 KLHL7Q8IXQ5 586 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 MICALL1Q8N3F8 863 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 STK33Q9BYT3 514 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 RPAP3Q9H6T3 665 aaPredicted RBP13.98□□□□□ -0.17
PRAME-213ENST00000492657 TAS2R14Q9NYV8 317 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 TELO2Q9Y4R8 837 aa13.98□□□□□ -0.17
PRAME-213ENST00000492657 GOLGA8IPA6NC78 632 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 GOLGA8JA6NMD2 632 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 CCNE2O96020 404 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 FERP16591 822 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 LIG3P49916 1009 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 BFSP1Q12934 665 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 PGM5Q15124 567 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 C10orf76Q5T2E6 689 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 PLEKHO2Q8TD55 490 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 ATG4CQ96DT6 458 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 TAOK3Q9H2K8 898 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 EPB41L5Q9HCM4 733 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 OSGEPQ9NPF4 335 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 BTNL10A8MVZ5 291 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
PRAME-213ENST00000492657 SLC16A4O15374 487 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 CEP104O60308 925 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 FAM153BP0C7A2 387 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 GUCY2DQ02846 1103 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 TNIP1Q15025 636 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 FAM153CQ494X1 144 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 SLC30A5Q8TAD4 765 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 TAF4BQ92750 862 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 ZKSCAN4Q969J2 545 aaPredicted RBP13.97□□□□□ -0.17
PRAME-213ENST00000492657 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 GJA3Q9Y6H8 435 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 UBE4BO95155 1302 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
PRAME-213ENST00000492657 TESPA1A2RU30 521 aaPredicted RBP13.96□□□□□ -0.17
PRAME-213ENST00000492657 NFKBIEO00221 500 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 SORBS3O60504 671 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
PRAME-213ENST00000492657 IVLP07476 585 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 ABCB4P21439 1286 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 IBSPP21815 317 aaPredicted RBP13.96□□□□□ -0.17
PRAME-213ENST00000492657 YWHABP31946 246 aaKnown RBP13.96□□□□□ -0.17
PRAME-213ENST00000492657 GCLMP48507 274 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 PEX3P56589 373 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 SOX10P56693 466 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 LMO3Q8TAP4 145 aa13.96□□□□□ -0.17
PRAME-213ENST00000492657 LPAR1Q92633 364 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms