RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 DYDC2Q96IM9 177 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 CEP170P1Q96L14 293 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 NLRP4Q96MN2 994 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 CASD1Q96PB1 797 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
LSM2-213ENST00000491421 INO80BQ9C086 356 aaPredicted RBP9.25□□□□□ -0.93
LSM2-213ENST00000491421 ZSWIM4Q9H7M6 989 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 DACT1Q9NYF0 836 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 RGL1Q9NZL6 768 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 WRAP73Q9P2S5 460 aaPredicted RBP9.25□□□□□ -0.93
LSM2-213ENST00000491421 LIMCH1Q9UPQ0 1083 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 PPME1Q9Y570 386 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 RALGAPA2Q2PPJ7 1873 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 A0A0U1RQF3 1178 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 NEMFO60524 1076 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 EOMESO95936 686 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 YWHABP31946 246 aaKnown RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 LTBRP36941 435 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 NRIP1P48552 1158 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 CYP4A11Q02928 519 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 UBE3AQ05086 875 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 ST3GAL1Q11201 340 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 CLUL1Q15846 466 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 XKR9Q5GH70 373 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 OTUD6AQ7L8S5 288 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 CATSPER4Q7RTX7 472 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 ADGRD2Q7Z7M1 963 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 KSR1Q8IVT5 923 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 CCDC83Q8IWF9 413 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 TPH2Q8IWU9 490 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 GJD3Q8N144 294 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 TMEM143Q96AN5 459 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 C1QTNF1Q9BXJ1 281 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 CWH43Q9H720 699 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 TLR9Q9NR96 1032 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 BMP2KQ9NSY1 1161 aaPredicted RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 RNF19AQ9NV58 838 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 PIN4Q9Y237 131 aaKnown RBP9.24□□□□□ -0.93
LSM2-213ENST00000491421 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 COL4A3BPQ9Y5P4 624 aa9.24□□□□□ -0.93
LSM2-213ENST00000491421 NCOR1O75376 2440 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 LINC01565O15544 149 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 TBX10O75333 385 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 SKIP12755 728 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 ATF7P17544 494 aaPredicted RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 PPM1AP35813 382 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 PBX3P40426 434 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 TXKP42681 527 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 PHKA2P46019 1235 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 NDUFV1P49821 464 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 RAB27AP51159 221 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 DLX2Q07687 328 aaPredicted RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 ADAM15Q13444 863 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 EMC2Q15006 297 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
LSM2-213ENST00000491421 CLLU1OSQ5K130 101 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 TWF2Q6IBS0 349 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 KCNT2Q6UVM3 1135 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 LRRC55Q6ZSA7 311 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 RBM23Q86U06 439 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 ZNF598Q86UK7 904 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 HELQQ8TDG4 1101 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 TCP11Q8WWU5 503 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 PRPF31Q8WWY3 499 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 PSPC1Q8WXF1 523 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 ZNF558Q96NG5 402 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 EIF2AK1Q9BQI3 630 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 LLPHQ9BRT6 129 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 TRAIPQ9BWF2 469 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 MRPL9Q9BYD2 267 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 TLE6Q9H808 572 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 TTC12Q9H892 705 aaPredicted RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 CD320Q9NPF0 282 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 PUF60Q9UHX1 559 aaKnown RBP9.23□□□□□ -0.93
LSM2-213ENST00000491421 LZTS1Q9Y250 596 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
LSM2-213ENST00000491421 BRWD1Q9NSI6 2320 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 WNT7AO00755 349 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ZBTB39O15060 712 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 SLITRK3O94933 977 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 SRGAP2CP0DJJ0 459 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 MCM7P33993 719 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ERVFC1P60507 584 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 KRT17Q04695 432 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ZP2Q05996 745 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 LAMTOR4Q0VGL1 99 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 SMAD4Q13485 552 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms