RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SUCLA2Q9P2R7 463 aaPredicted RBP24■■□□□ 1.43
VCPKMT-204ENST00000491402 NMT1P30419 496 aaKnown RBP23.99■■□□□ 1.43
VCPKMT-204ENST00000491402 MXD4Q14582 209 aaPredicted RBP23.99■■□□□ 1.43
VCPKMT-204ENST00000491402 COBLL1Q53SF7 1204 aa23.99■■□□□ 1.43
VCPKMT-204ENST00000491402 GDF6Q6KF10 455 aaPredicted RBP23.99■■□□□ 1.43
VCPKMT-204ENST00000491402 A0A0U1RQG5 324 aaPredicted RBP23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 CCDC169A6NNP5 214 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 PPP1R3GB7ZBB8 358 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 K7ENM7 598 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 GCNT3O95395 438 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 MAPTP10636 758 aaKnown RBP23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 NAMPTP43490 491 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 LAMTOR4Q0VGL1 99 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 PPP2R5AQ15172 486 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 ZNF720Q7Z2F6 126 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 RHPN2Q8IUC4 686 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 SPIRE2Q8WWL2 714 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 NTPCRQ9BSD7 190 aaKnown RBP23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 DACH1Q9UI36 760 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 SMIM35A0A1B0GVV1 85 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 MYBP10242 640 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 CYP2C9P11712 490 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 SMTNP53814 917 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 NCKAP1LP55160 1127 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 EPM2AIP1Q7L775 607 aaPredicted RBP23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 KIAA0319LQ8IZA0 1049 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 ADSSL1Q8N142 457 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 MAP7D2Q96T17 732 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 KIFC3Q9BVG8 833 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 KMT5AQ9NQR1 393 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 KCNG1Q9UIX4 513 aa23.98■■□□□ 1.43
VCPKMT-204ENST00000491402 ADGRA3Q8IWK6 1321 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 ARVCFO00192 962 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 SLC16A4O15374 487 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 STIM1Q13586 685 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 CAPSQ13938 189 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 RUFY4Q6ZNE9 571 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 GAS2L3Q86XJ1 694 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 KSR1Q8IVT5 923 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 SLC17A8Q8NDX2 589 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 SCFD1Q8WVM8 642 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 AKT3Q9Y243 479 aa23.97■■□□□ 1.43
VCPKMT-204ENST00000491402 LRRIQ4A6NIV6 560 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 PTPN11Q06124 597 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 LRRC26Q2I0M4 334 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ZC2HC1CQ53FD0 456 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 KLHL10Q6JEL2 608 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 MYOCDQ8IZQ8 938 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 GUF1Q8N442 669 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 SLC43A3Q8NBI5 491 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 TMEM161BQ8NDZ6 487 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 NAT10Q9H0A0 1025 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 FAM49AQ9H0Q0 323 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ST6GALNAC4Q9H4F1 302 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 EIF3DO15371 548 aaKnown RBP eCLIP23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ASAP2O43150 1006 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 PPP1R37O75864 691 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 CAVIN2O95810 425 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 VTNP04004 478 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 PPP1R2P41236 205 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ZNF165P49910 485 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 CDK7P50613 346 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 STXBP4Q6ZWJ1 553 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 HAUS6Q7Z4H7 955 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 RNF149Q8NC42 400 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 STRA6Q9BX79 667 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ARHGAP28Q9P2N2 729 aa23.96■■□□□ 1.43
VCPKMT-204ENST00000491402 ALCAMQ13740 583 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 TAF2Q6P1X5 1199 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 DEPTORQ8TB45 409 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 NLRP4Q96MN2 994 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 CTAGE1Q96RT6 745 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 PCDHB13Q9Y5F0 798 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 SIP14410 1827 aa23.95■■□□□ 1.42
VCPKMT-204ENST00000491402 PSMA7O14818 248 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 PRPF6O94906 941 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 KIF20AO95235 890 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 SRGAP2CP0DJJ0 459 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 PTGISQ16647 500 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 BMT2Q1RMZ1 405 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 CT47A1Q5JQC4 288 aaPredicted RBP23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 ZNF507Q8TCN5 953 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 DNAJB3Q8WWF6 145 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 CTNND2Q9UQB3 1225 aa23.94■■□□□ 1.42
VCPKMT-204ENST00000491402 ERCC5P28715 1186 aaPredicted RBP23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 GTF2BQ00403 316 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 KCNA1Q09470 495 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 PAK1Q13153 545 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 TFDP1Q14186 410 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 SNX17Q15036 470 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 TRIM60Q495X7 471 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 L1TD1Q5T7N2 865 aaKnown RBP23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 SERINC5Q86VE9 423 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 NELFCDQ8IXH7 590 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 DHTKD1Q96HY7 919 aaPredicted RBP23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 BPIFA3Q9BQP9 254 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 TRMT13Q9NUP7 481 aaKnown RBP23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 ATP11BQ9Y2G3 1177 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 UBE4BO95155 1302 aa23.93■■□□□ 1.42
VCPKMT-204ENST00000491402 DENND3A2RUS2 1198 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms