RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TMEM87AQ8NBN3 555 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 NLRP7Q8WX94 980 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 LENG9Q96B70 501 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 ZBP1Q9H171 429 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 NAP1L2Q9ULW6 460 aaPredicted RBP23.31■■□□□ 1.32
CLIP2-208ENST00000491075 USTQ9Y2C2 406 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 IRAK3Q9Y616 596 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 NT5C1B-RDH14C9J2C7 533 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 ADAMTS3O15072 1205 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 FGFR4P22455 802 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 ADD1P35611 737 aaKnown RBP23.3■■□□□ 1.32
CLIP2-208ENST00000491075 NBL1P41271 181 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 POLGP54098 1239 aaPredicted RBP23.3■■□□□ 1.32
CLIP2-208ENST00000491075 KRT32Q14532 448 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 ATAT1Q5SQI0 421 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 ASTLQ6HA08 431 aaPredicted RBP23.3■■□□□ 1.32
CLIP2-208ENST00000491075 CHST12Q9NRB3 414 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 DBR1Q9UK59 544 aaKnown RBP23.3■■□□□ 1.32
CLIP2-208ENST00000491075 SPTBN4Q9H254 2564 aa23.3■■□□□ 1.32
CLIP2-208ENST00000491075 ZC3H11AO75152 810 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLIP2-208ENST00000491075 ASGR2P07307 311 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 HMGB1P09429 215 aaKnown RBP23.29■■□□□ 1.32
CLIP2-208ENST00000491075 WEE2P0C1S8 567 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 SFNP31947 248 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 CDC42EP1Q00587 391 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 ADCK5Q3MIX3 580 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 BICD2Q8TD16 824 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 RIT2Q99578 217 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 TRAIPQ9BWF2 469 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 MFSD1Q9H3U5 465 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 SMOC2Q9H3U7 446 aa23.29■■□□□ 1.32
CLIP2-208ENST00000491075 CTSAP10619 480 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 PHKA2P46019 1235 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 JAK3P52333 1124 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 FGD1P98174 961 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 FOXK2Q01167 660 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 UGCGQ16739 394 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 ASCL5Q7RTU5 278 aa23.28■■□□□ 1.32
CLIP2-208ENST00000491075 DDX53Q86TM3 631 aaKnown RBP23.28■■□□□ 1.32
CLIP2-208ENST00000491075 C12orf76Q8N812 135 aaPredicted RBP23.28■■□□□ 1.32
CLIP2-208ENST00000491075 GCOM2Q9BZD3 368 aaPredicted RBP23.28■■□□□ 1.32
CLIP2-208ENST00000491075 NID2Q14112 1375 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 PTPRZ1P23471 2315 aaPredicted RBP23.27■■□□□ 1.32
CLIP2-208ENST00000491075 PRR23AA6NEV1 266 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 GAS7O60861 476 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 SKIP12755 728 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 EPCAMP16422 314 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 SFPQP23246 707 aaKnown RBP eCLIP23.27■■□□□ 1.32
CLIP2-208ENST00000491075 CLCN5P51795 746 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 TMEM173Q86WV6 379 aaPredicted RBP23.27■■□□□ 1.32
CLIP2-208ENST00000491075 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 AUTS2Q8WXX7 1259 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 IGSF21Q96ID5 467 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 LIMD1Q9UGP4 676 aa23.27■■□□□ 1.32
CLIP2-208ENST00000491075 MSH4O15457 936 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 PRPF3O43395 683 aaKnown RBP23.26■■□□□ 1.31
CLIP2-208ENST00000491075 CHMP2AO43633 222 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 CSDE1O75534 798 aaKnown RBP23.26■■□□□ 1.31
CLIP2-208ENST00000491075 TARBP2Q15633 366 aaKnown RBP23.26■■□□□ 1.31
CLIP2-208ENST00000491075 LRCH2Q5VUJ6 765 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 TWF2Q6IBS0 349 aaKnown RBP23.26■■□□□ 1.31
CLIP2-208ENST00000491075 GLB1LQ6UWU2 654 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 CABP7Q86V35 215 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 PPFIBP1Q86W92 1011 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 CCDC148Q8NFR7 591 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 SLC22A17Q8WUG5 538 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 TEKT3Q9BXF9 490 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 C2orf16Q68DN1 1984 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 RIF1Q5UIP0 2472 aaKnown RBP23.26■■□□□ 1.31
CLIP2-208ENST00000491075 FAM186AA6NE01 2351 aa23.26■■□□□ 1.31
CLIP2-208ENST00000491075 DNM2P50570 870 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 DRP2Q13474 957 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 RDM1Q8NG50 284 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 SLC5A5Q92911 643 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 ACSF2Q96CM8 615 aaPredicted RBP23.25■■□□□ 1.31
CLIP2-208ENST00000491075 CCDC136Q96JN2 1154 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 INO80BQ9C086 356 aaPredicted RBP23.25■■□□□ 1.31
CLIP2-208ENST00000491075 UNC45AQ9H3U1 944 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 SFXN1Q9H9B4 322 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 CYP26B1Q9NR63 512 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 TBC1D13Q9NVG8 400 aa23.25■■□□□ 1.31
CLIP2-208ENST00000491075 SEPT9Q9UHD8 586 aaPredicted RBP23.25■■□□□ 1.31
CLIP2-208ENST00000491075 RAB27AP51159 221 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 USP11P51784 963 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 AKAP17AQ02040 695 aaKnown RBP23.24■■□□□ 1.31
CLIP2-208ENST00000491075 RNASELQ05823 741 aaKnown RBP23.24■■□□□ 1.31
CLIP2-208ENST00000491075 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 BMP2KLQ5H9B9 411 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 NOMO2Q5JPE7 1267 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 KANK3Q6NY19 840 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 ZNF410Q86VK4 478 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 LPPQ93052 612 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 NIFKQ9BYG3 293 aaKnown RBP23.24■■□□□ 1.31
CLIP2-208ENST00000491075 NRDE2Q9H7Z3 1164 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 STK39Q9UEW8 545 aa23.24■■□□□ 1.31
CLIP2-208ENST00000491075 PIN4Q9Y237 131 aaKnown RBP23.24■■□□□ 1.31
CLIP2-208ENST00000491075 DMDP11532 3685 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 A0A087WZ62 844 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 GALTP07902 379 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 XKR3Q5GH77 459 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms