RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ABCD1P33897 745 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 PHKA2P46019 1235 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 ZNF131P52739 623 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 PTENP60484 403 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 MAPK7Q13164 816 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 LPIN1Q14693 890 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 ARSHQ5FYA8 562 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 PRPF38BQ5VTL8 546 aaKnown RBP17.53■□□□□ 0.4
TRA2A-208ENST00000490942 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 SPIRE2Q8WWL2 714 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 NLRP7Q8WX94 980 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 SEPT8Q92599 483 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 DHX58Q96C10 678 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 FTHL17Q9BXU8 183 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 C2orf40Q9H1Z8 148 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 IFT122Q9HBG6 1241 aa17.53■□□□□ 0.4
TRA2A-208ENST00000490942 LARSQ9P2J5 1176 aaKnown RBP17.53■□□□□ 0.4
TRA2A-208ENST00000490942 HIP1RO75146 1068 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 NDUFA8P51970 172 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 UBE2HP62256 183 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 CAPSQ13938 189 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 CDCA2Q69YH5 1023 aaPredicted RBP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 DAW1Q8N136 415 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 RNF149Q8NC42 400 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 ASAP3Q8TDY4 903 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 VWCEQ96DN2 955 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 NLRP4Q96MN2 994 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 SCLT1Q96NL6 688 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 OSMRQ99650 979 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 IFIH1Q9BYX4 1025 aaKnown RBP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 MTIF3Q9H2K0 278 aaKnown RBP17.52■□□□□ 0.4
TRA2A-208ENST00000490942 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
TRA2A-208ENST00000490942 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
TRA2A-208ENST00000490942 A0A087WZ62 844 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 ABHD14A-ACY1A0A1B0GW23 586 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 A0A1W2PPC1 479 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 H0YCG3 227 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 ACTN4O43707 911 aaKnown RBP17.51■□□□□ 0.39
TRA2A-208ENST00000490942 KRT18P05783 430 aaKnown RBP17.51■□□□□ 0.39
TRA2A-208ENST00000490942 GHRP10912 638 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 PLS3P13797 630 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 EFNA5P52803 228 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 FAM160A1Q05DH4 1040 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 PAK2Q13177 524 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 GIT2Q14161 759 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 C16orf59Q7L2K0 433 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 ELOA2Q8IYF1 753 aaPredicted RBP17.51■□□□□ 0.39
TRA2A-208ENST00000490942 TMEM40Q8WWA1 233 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 TIGD1Q96MW7 591 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 REEP2Q9BRK0 252 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
TRA2A-208ENST00000490942 PRO3102Q9H379 93 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 PARVGQ9HBI0 331 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 CHST12Q9NRB3 414 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 SEL1LQ9UBV2 794 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 GINS2Q9Y248 185 aa17.51■□□□□ 0.39
TRA2A-208ENST00000490942 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 MYMKA6NI61 221 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 TBCAO75347 108 aaKnown RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 FGBP02675 491 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 SRGAP2CP0DJJ0 459 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 GAP43P17677 238 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 SMTNP53814 917 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 KSR1Q8IVT5 923 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 ZBTB8OSQ8IWT0 167 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 FMR1NBQ8N0W7 255 aaPredicted RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 ENGASEQ8NFI3 743 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 DBF4BQ8NFT6 615 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 HERVK_113Q902F9 699 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 DDX12PQ92771 950 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 C7orf25Q9BPX7 421 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 TRIM9Q9C026 710 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 AGO3Q9H9G7 860 aaKnown RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 CDHR5Q9HBB8 845 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 ERVK-5Q9HDB9 667 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 PADI3Q9ULW8 664 aa17.5■□□□□ 0.39
TRA2A-208ENST00000490942 NOC2LQ9Y3T9 749 aaKnown RBP17.5■□□□□ 0.39
TRA2A-208ENST00000490942 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 FAM13AO94988 1023 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 ZNF202O95125 648 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 NPTX2P47972 431 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 IKBKEQ14164 716 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 FAM187BQ17R55 369 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 LONRF3Q496Y0 759 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 TMEM240Q5SV17 173 aa17.49■□□□□ 0.39
TRA2A-208ENST00000490942 RASIP1Q5U651 963 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms