RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TOP1MTQ969P6 601 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF668Q96K58 619 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 PPP1R16BQ96T49 567 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF577Q9BSK1 485 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 TUBE1Q9UJT0 475 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 COL4A4P53420 1690 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 MYO7AQ13402 2215 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 BRWD1Q9NSI6 2320 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 RRN3P2A6NIE6 340 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 IPO5O00410 1097 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 BACH1O14867 736 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF862O60290 1169 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TDP2O95551 362 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 AMHP03971 560 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 IBSPP21815 317 aaPredicted RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 GNA11P29992 359 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 GATMP50440 423 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 AK2P54819 239 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 MRPS6P82932 125 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 KRT76Q01546 638 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 UGCGQ16739 394 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TMEM31Q5JXX7 168 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 KIAA0319LQ8IZA0 1049 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TBCKQ8TEA7 893 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 IFIH1Q9BYX4 1025 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 GLT8D2Q9H1C3 349 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 UNC45AQ9H3U1 944 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 AZI2Q9H6S1 392 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF302Q9NR11 478 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 GABBR1Q9UBS5 961 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 NOC2LQ9Y3T9 749 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 INSL6Q9Y581 213 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 PCDHA2Q9Y5H9 948 aa8.29□□□□□ -1.08
PRPF4B-208ENST00000490653 TMEM150BA6NC51 233 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TRIM66O15016 1216 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 EPB41L2O43491 1005 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 HBP1O60381 514 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 MGEA5O60502 916 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 PFKFB2O60825 505 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 CAND2O75155 1236 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 STBD1O95210 358 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 LINC00271P0C7V0 271 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 FDPSP14324 419 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 IL9P15248 144 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 SUZ12Q15022 739 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 ME3Q16798 604 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 INF2Q27J81 1249 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 MIS18BP1Q6P0N0 1132 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TAF2Q6P1X5 1199 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 FAM178BQ8IXR5 827 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 BLIDQ8IZY5 108 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 GPR161Q8N6U8 529 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 ATP8B4Q8TF62 1192 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TGS1Q96RS0 853 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 SH2D3AQ9BRG2 576 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 CELF4Q9BZC1 486 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 PADI3Q9ULW8 664 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 PCDHA4Q9UN74 947 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 COG5Q9UP83 839 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 GINS2Q9Y248 185 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TRPV2Q9Y5S1 764 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 WDR81Q562E7 1941 aa8.28□□□□□ -1.08
PRPF4B-208ENST00000490653 TTC3P53804 2025 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 SMIM35A0A1B0GVV1 85 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 EML1O00423 815 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 CPLX1O14810 134 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 CHMP2AO43633 222 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 EFCAB14O75071 495 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 DEXIO95424 95 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 VTNP04004 478 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 USP11P51784 963 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 CLCN3P51790 818 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 ST3GAL1Q11201 340 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 DRP2Q13474 957 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 QPCTQ16769 361 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 EPC2Q52LR7 807 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 ZNF484Q5JVG2 852 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 FAM160B1Q5W0V3 765 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 CKAP2LQ8IYA6 745 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 LRRC71Q8N4P6 559 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 CCDC12Q8WUD4 166 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 SLC5A5Q92911 643 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 YME1L1Q96TA2 773 aa8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 SLKQ9H2G2 1235 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-208ENST00000490653 SH3GLB2Q9NR46 395 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms