RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 NRXN1Q9ULB1 1477 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 FITM1A5D6W6 292 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 GOLGA8AA7E2F4 631 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 HGSO14964 777 aaPredicted RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 EFEMP2O95967 443 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 CT47B1P0C2W7 299 aaPredicted RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 GRIN1Q05586 938 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 TUSC3Q13454 348 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 SEC23AQ15436 765 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 CLUL1Q15846 466 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 TIGD5Q53EQ6 642 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 BTBD8Q5XKL5 378 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 KCTD1Q719H9 257 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 PNMA8AQ86V59 439 aaPredicted RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 CCDC120Q96HB5 630 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 ZFP64Q9NPA5 681 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 ACSL6Q9UKU0 697 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 ZNF652Q9Y2D9 606 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 SPEF1Q9Y4P9 236 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 ERBINQ96RT1 1412 aa6.31□□□□□ -1.4
SSX2IP-208ENST00000490476 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 MAFKO60675 156 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 TSPY4P0CV99 314 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 TSPY10P0CW01 314 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 FUT4P22083 530 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 SMAD3P84022 425 aaKnown RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 PLCL1Q15111 1095 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 PCBP2Q15366 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 SMAD2Q15796 467 aaKnown RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 CHRNA2Q15822 529 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 SLC23A3Q6PIS1 610 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 C14orf80Q86SX3 495 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 RASSF3Q86WH2 238 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 MYO1HQ8N1T3 1032 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 TGFBRAP1Q8WUH2 860 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 RTFDC1Q9BY42 306 aaPredicted RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 AP5M1Q9H0R1 490 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 ACSS2Q9NR19 701 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 KCNH7Q9NS40 1196 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 MKS1Q9NXB0 559 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 MYOTQ9UBF9 498 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 PCDHB4Q9Y5E5 795 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 B3GALT1Q9Y5Z6 326 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 LY75O60449 1722 aa6.3□□□□□ -1.4
SSX2IP-208ENST00000490476 PASKQ96RG2 1323 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 LAMA2P24043 3122 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 BRCA2P51587 3418 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 E2F8A0AVK6 867 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 FAM90A27PA6NNH2 459 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 XPOTO43592 962 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 PRC1O43663 620 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 KDM1AO60341 852 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 BUB1BO60566 1050 aaPredicted RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 CLASP2O75122 1294 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 PRNPP04156 253 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 TMEM253P0C7T8 217 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 GLI4P10075 376 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 ZSCAN20P17040 1043 aaPredicted RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 SDHBP21912 280 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 ARL4AP40617 200 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 DEFB115Q30KQ5 88 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 DCP2Q8IU60 420 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 TP53INP2Q8IXH6 220 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 ZNF610Q8N9Z0 462 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 JPH3Q8WXH2 748 aaPredicted RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 RTF1Q92541 710 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 DLG3Q92796 817 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 C8orf48Q96LL4 319 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 CDH19Q9H159 772 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 SMOC1Q9H4F8 434 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 PAK6Q9NQU5 681 aaPredicted RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 TELO2Q9Y4R8 837 aa6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 RBBP6Q7Z6E9 1792 aaKnown RBP6.29□□□□□ -1.4
SSX2IP-208ENST00000490476 USP6P35125 1406 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 MUC3AQ02505 3323 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 CASKIN1Q8WXD9 1431 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 K7ESF4 209 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 SGSM2O43147 1006 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 H2AFYO75367 372 aaKnown RBP6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 CYP17A1P05093 508 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 RAC2P15153 192 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 PTPN1P18031 435 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms