RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ACVRL1P37023 503 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 CCZ1BP86790 482 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 CCZ1P86791 482 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ST3GAL1Q11201 340 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 DHX8Q14562 1220 aaKnown RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 EZH2Q15910 746 aaKnown RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 CCDC93Q567U6 631 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 GIMAP6Q6P9H5 292 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF790Q6PG37 636 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 FBXO38Q6PIJ6 1188 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 CCDC186Q7Z3E2 898 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 LRP10Q7Z4F1 713 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 SPPL2CQ8IUH8 684 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 OR6P1Q8NGX9 317 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 CACTINQ8WUQ7 758 aaKnown RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 SUCLG2Q96I99 432 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ZSCAN31Q96LW9 406 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 GPR101Q96P66 508 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 UPF3BQ9BZI7 483 aaKnown RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 LRRCC1Q9C099 1032 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 OSBPL5Q9H0X9 879 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ALDH8A1Q9H2A2 487 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 YY1AP1Q9H869 796 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF446Q9NWS9 450 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 HYPKQ9NX55 129 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 KLHL14Q9P2G3 628 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 GPR160Q9UJ42 338 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF215Q9UL58 517 aaPredicted RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 PCDHB10Q9UN67 800 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 PLA2G2DQ9UNK4 145 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 LIMCH1Q9UPQ0 1083 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 PA2G4Q9UQ80 394 aaKnown RBP3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 SNX14Q9Y5W7 946 aa3.98□□□□□ -1.77
CRNKL1-203ENST00000490258 DUOX1Q9NRD9 1551 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 MYH8P13535 1937 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 EXOC5O00471 708 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 IRS4O14654 1257 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 FIBPO43427 364 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 ZRANB2O95218 330 aaKnown RBP eCLIP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 SLU7O95391 586 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 TP53P04637 393 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 GNAI2P04899 355 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CHGBP05060 677 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 EPHX1P07099 455 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 GNAI3P08754 354 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 PNLIPP16233 465 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 PDCP20941 246 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 SDHBP21912 280 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CRKLP46109 303 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 KCNJ4P48050 445 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 AK2P54819 239 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 EIF6P56537 245 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 RTP1P59025 263 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 KRT85P78386 507 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 ATP8B2P98198 1209 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 MVKQ03426 396 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 LRMPQ12912 555 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 BMS1Q14692 1282 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CBX2Q14781 532 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 TAF7Q15545 349 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 HSP90AB3PQ58FF7 597 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 TAF7LQ5H9L4 462 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 UBXN11Q5T124 520 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CEP128Q6ZU80 1094 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 LRRC8AQ8IWT6 810 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CCDC144CPQ8IYA2 1237 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 TTC5Q8N0Z6 440 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 CCAR2Q8N163 923 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 FIBCD1Q8N539 461 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 MSL3Q8N5Y2 521 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 LINC01356Q8N9X3 169 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 IQUBQ8NA54 791 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 SSH3Q8TE77 659 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 BRF1Q92994 677 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 C16orf45Q96MC5 204 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 PSMD1Q99460 953 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 ASCC2Q9H1I8 757 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 IL25Q9H293 177 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 SMPD4Q9NXE4 827 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 APEX2Q9UBZ4 518 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 FEZ2Q9UHY8 353 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 TRPC5Q9UL62 973 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 SMC3Q9UQE7 1217 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 MAP3K2Q9Y2U5 619 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 LRRFIP2Q9Y608 721 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 COL4A5P29400 1685 aa3.97□□□□□ -1.77
CRNKL1-203ENST00000490258 PSME4Q14997 1843 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 PNMA6EA0A0J9YXQ4 647 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 A0A1W2PQ45 241 aaPredicted RBP3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 A0A1W2PQY0 241 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 PI4KAP2A4QPH2 592 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 WTIPA6NIX2 430 aaPredicted RBP3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 SNAP23O00161 211 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 CTAGE5O15320 804 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 DTNBO60941 627 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 RAB11FIP3O75154 756 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 LARGE1O95461 756 aa3.96□□□□□ -1.78
CRNKL1-203ENST00000490258 MAP4K4O95819 1239 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms