RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 IPO5O00410 1097 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 MAGEB2O15479 319 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 HRO43593 1189 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 CLASP2O75122 1294 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 EOMESO95936 686 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 VTNP04004 478 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 CYP3A4P08684 503 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 FAM86B2P0C5J1 330 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 EIF4BP23588 611 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 PBX3P40426 434 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 ADCY7P51828 1080 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 NAPAP54920 295 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 CLLU1OSQ5K130 101 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 ZNF746Q6NUN9 644 aaPredicted RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 SWSAP1Q6NVH7 229 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 SMAP1Q8IYB5 467 aaPredicted RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 CCDC82Q8N4S0 544 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 TDRD5Q8NAT2 981 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 PGBD1Q96JS3 809 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 MRPL9Q9BYD2 267 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 ADAMTS10Q9H324 1103 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 RBM28Q9NW13 759 aaKnown RBP9.3□□□□□ -0.92
USP39-216ENST00000490193 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
USP39-216ENST00000490193 DDX39AO00148 427 aaKnown RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 ZSCAN20P17040 1043 aaPredicted RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 POLGP54098 1239 aaPredicted RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 NLRP11P59045 1033 aaKnown RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 GIT2Q14161 759 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 BMS1Q14692 1282 aaKnown RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 MICU3Q86XE3 530 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 PLA2G4DQ86XP0 818 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 METTL13Q8N6R0 699 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 EXOC6Q8TAG9 804 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 FAM167AQ96KS9 214 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 PPP1R16BQ96T49 567 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 TRAIPQ9BWF2 469 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 MFRPQ9BY79 579 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 LSG1Q9H089 658 aaKnown RBP9.29□□□□□ -0.92
USP39-216ENST00000490193 ZBP1Q9H171 429 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 SMOC2Q9H3U7 446 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 TBC1D22BQ9NU19 505 aa9.29□□□□□ -0.92
USP39-216ENST00000490193 FRYLO94915 3013 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 SMCO2A6NFE2 343 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 SLC27A2O14975 620 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ASGR2P07307 311 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 PSAPP07602 524 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 CTSAP10619 480 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 DARSP14868 501 aaKnown RBP9.28□□□□□ -0.92
USP39-216ENST00000490193 AOC1P19801 751 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 TMOD1P28289 359 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ZNF76P36508 570 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ALDH7A1P49419 539 aaKnown RBP9.28□□□□□ -0.92
USP39-216ENST00000490193 GPC3P51654 580 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 CLCN3P51790 818 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 BCAR1P56945 870 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 NECTIN1Q15223 517 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ATAT1Q5SQI0 421 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 RARS2Q5T160 578 aaKnown RBP9.28□□□□□ -0.92
USP39-216ENST00000490193 EFCAB12Q6NXP0 572 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 FRMD5Q7Z6J6 570 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 RAB11FIP4Q86YS3 637 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 CKAP2LQ8IYA6 745 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 TMEM169Q96HH4 297 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 AKT3Q9Y243 479 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 PCDHA10Q9Y5I2 948 aa9.28□□□□□ -0.92
USP39-216ENST00000490193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.27□□□□□ -0.93
USP39-216ENST00000490193 ESYT2A0FGR8 921 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 CXCL14O95715 111 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 WEE2P0C1S8 567 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 EPCAMP16422 314 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 NPR3P17342 541 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 ID4P47928 161 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 RCAN1P53805 252 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 CREB3L3Q68CJ9 461 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 SYNE3Q6ZMZ3 975 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 DDX53Q86TM3 631 aaKnown RBP9.27□□□□□ -0.93
USP39-216ENST00000490193 PPFIBP1Q86W92 1011 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 CCDC105Q8IYK2 499 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 VPS52Q8N1B4 723 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 LRRC71Q8N4P6 559 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 C12orf76Q8N812 135 aaPredicted RBP9.27□□□□□ -0.93
USP39-216ENST00000490193 HELQQ8TDG4 1101 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 RTP3Q9BQQ7 232 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 LRRC2Q9BYS8 371 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 MFSD1Q9H3U5 465 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 CHST12Q9NRB3 414 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 DACT1Q9NYF0 836 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 GABBR1Q9UBS5 961 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms