RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ZNF703Q9H7S9 590 aaPredicted RBP5.61□□□□□ -1.51
HMGN1-218ENST00000490032 IFT57Q9NWB7 429 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 SH3BP1Q9Y3L3 701 aa5.61□□□□□ -1.51
HMGN1-218ENST00000490032 ZNF891A8MT65 544 aaPredicted RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 MAFGO15525 162 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 TGM5O43548 720 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 OPHN1O60890 802 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 VSIG10L2P0DP72 767 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 CD40P25942 277 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 NEK4P51957 841 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 PTH1RQ03431 593 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 GPR158Q5T848 1215 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 SGMS1Q86VZ5 419 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 CACTINQ8WUQ7 758 aaKnown RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 CHTF18Q8WVB6 975 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 RTF1Q92541 710 aaKnown RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 RPL10LQ96L21 214 aaKnown RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 FEZ1Q99689 392 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 ZNF341Q9BYN7 854 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 OSBPL6Q9BZF3 934 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 PCED1AQ9H1Q7 454 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 MTG2Q9H4K7 406 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 HECAQ9UBI9 543 aaPredicted RBP5.6□□□□□ -1.51
HMGN1-218ENST00000490032 DNAI1Q9UI46 699 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 PLAAQ9Y263 795 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 GIT1Q9Y2X7 761 aa5.6□□□□□ -1.51
HMGN1-218ENST00000490032 A0A0A6YYK5 440 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 CAPN14A8MX76 684 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 NPIPB8E9PQR5 432 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 CYP27B1O15528 508 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 CDC45O75419 566 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 C1SP09871 688 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 PCBP1Q15365 356 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 UNQ6494/PRO21346Q6UXR6 183 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 TMPRSS6Q8IU80 811 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 PASD1Q8IV76 773 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 THEMISQ8N1K5 641 aaPredicted RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 ANKRD35Q8N283 1001 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 PPM1KQ8N3J5 372 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 SMC1BQ8NDV3 1235 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 PPP1R14CQ8TAE6 165 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 SOX7Q9BT81 388 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 THG1LQ9NWX6 298 aaKnown RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 USP36Q9P275 1121 aaKnown RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 SYNPO2Q9UMS6 1093 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 HS3ST3A1Q9Y663 406 aa5.59□□□□□ -1.51
HMGN1-218ENST00000490032 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
HMGN1-218ENST00000490032 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 DAPK3O43293 454 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 MTSS1O43312 755 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 TOX4O94842 621 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 JUNP05412 331 aaKnown RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 HNRNPLP14866 589 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 PHC1P78364 1004 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 DGCR2P98153 550 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 MAN2A1Q16706 1144 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 DALRD3Q5D0E6 543 aaKnown RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 IGFL4Q6B9Z1 124 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 CNNM4Q6P4Q7 775 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 FAM111BQ6SJ93 734 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 GAREM2Q75VX8 874 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 ZFPM1Q8IX07 1006 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 DHX37Q8IY37 1157 aaKnown RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 TARS2Q9BW92 718 aaKnown RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 C14orf93Q9H972 538 aaKnown RBP5.58□□□□□ -1.52
HMGN1-218ENST00000490032 IL23AQ9NPF7 189 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 CEP72Q9P209 647 aa5.58□□□□□ -1.52
HMGN1-218ENST00000490032 UBE2QL1A1L167 161 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 APOL3O95236 402 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 KIR2DL3P43628 341 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 KPNA1P52294 538 aaPredicted RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 KLF10Q13118 480 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 SEPT7Q16181 437 aaKnown RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 LSM12Q3MHD2 195 aaKnown RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 MIEF2Q96C03 454 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 MFSD3Q96ES6 412 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 ZNF496Q96IT1 587 aaPredicted RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 HIST1H2AHQ96KK5 128 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 PLEKHG4BQ96PX9 1271 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 HIST1H2AJQ99878 128 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 TCF25Q9BQ70 676 aa5.57□□□□□ -1.52
HMGN1-218ENST00000490032 NOL10Q9BSC4 688 aaKnown RBP5.57□□□□□ -1.52
HMGN1-218ENST00000490032 MYPNQ86TC9 1320 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 GOLGA8BA8MQT2 603 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 FSBPO95073 299 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 ZNF202O95125 648 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 HMGA2P52926 109 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 OCRLQ01968 901 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 RRP1BQ14684 758 aaKnown RBP5.56□□□□□ -1.52
HMGN1-218ENST00000490032 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 ZNF610Q8N9Z0 462 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 MRIQ9BWK5 157 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 CSRNP2Q9H175 543 aa5.56□□□□□ -1.52
HMGN1-218ENST00000490032 GSG1L2A8MUP6 293 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms